Gene : Tp57577_TGAC_v2_gene21601 T. pratense v2
Defline:  (1 of 1) PTHR11079:SF58 - RNA PSEUDOURIDINE SYNTHASE 4, MITOCHONDRIAL Genomic Order:  939
Name:  ? Tp57577_TGAC_v2_gene21601 Secondary Identifier:  ? PAC:35979721
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21601 0.5kb upstream 0.5kb upstream 7780 true Tp57577_TGAC_v2_LG1: 7396521-7404300 Trifolium pratense
Tp57577_TGAC_v2_gene21601 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 7403801-7404300 Trifolium pratense
Tp57577_TGAC_v2_gene21601 0.5kb downstream 0.5kb downstream 7780 true Tp57577_TGAC_v2_LG1: 7396021-7403800 Trifolium pratense
Tp57577_TGAC_v2_gene21601 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 7396021-7396520 Trifolium pratense
Tp57577_TGAC_v2_gene21601 1.0kb upstream 1.0kb upstream 8280 true Tp57577_TGAC_v2_LG1: 7396521-7404800 Trifolium pratense
Tp57577_TGAC_v2_gene21601 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 7403801-7404800 Trifolium pratense
Tp57577_TGAC_v2_gene21601 1.0kb downstream 1.0kb downstream 8280 true Tp57577_TGAC_v2_LG1: 7395521-7403800 Trifolium pratense
Tp57577_TGAC_v2_gene21601 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 7395521-7396520 Trifolium pratense
Tp57577_TGAC_v2_gene21601 2.0kb upstream 2.0kb upstream 9280 true Tp57577_TGAC_v2_LG1: 7396521-7405800 Trifolium pratense
Tp57577_TGAC_v2_gene21601 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 7403801-7405800 Trifolium pratense
Tp57577_TGAC_v2_gene21601 2.0kb downstream 2.0kb downstream 9280 true Tp57577_TGAC_v2_LG1: 7394521-7403800 Trifolium pratense
Tp57577_TGAC_v2_gene21601 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 7394521-7396520 Trifolium pratense
Tp57577_TGAC_v2_gene21601 5.0kb upstream 5.0kb upstream 12280 true Tp57577_TGAC_v2_LG1: 7396521-7408800 Trifolium pratense
Tp57577_TGAC_v2_gene21601 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 7403801-7408800 Trifolium pratense
Tp57577_TGAC_v2_gene21601 5.0kb downstream 5.0kb downstream 12280 true Tp57577_TGAC_v2_LG1: 7391521-7403800 Trifolium pratense
Tp57577_TGAC_v2_gene21601 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 7391521-7396520 Trifolium pratense
Tp57577_TGAC_v2_gene21601 10.0kb upstream 10.0kb upstream 17280 true Tp57577_TGAC_v2_LG1: 7396521-7413800 Trifolium pratense
Tp57577_TGAC_v2_gene21601 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 7403801-7413800 Trifolium pratense
Tp57577_TGAC_v2_gene21601 10.0kb downstream 10.0kb downstream 17280 true Tp57577_TGAC_v2_LG1: 7386521-7403800 Trifolium pratense
Tp57577_TGAC_v2_gene21601 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 7386521-7396520 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307711 5265 Fabidae View MSA
124062896 5270 Rosid View MSA
123739402 5271 Pentapetalae View MSA
122789155 5272 Eudicot View MSA
122044884 5273 Angiosperm View MSA
121348863 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain