Gene : Tp57577_TGAC_v2_gene21609 T. pratense v2
Defline:  (1 of 2) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED Genomic Order:  931
Name:  ? Tp57577_TGAC_v2_gene21609 Secondary Identifier:  ? PAC:35978692
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21609 0.5kb upstream 0.5kb upstream 6150 true Tp57577_TGAC_v2_LG1: 7332667-7338816 Trifolium pratense
Tp57577_TGAC_v2_gene21609 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 7332667-7333166 Trifolium pratense
Tp57577_TGAC_v2_gene21609 0.5kb downstream 0.5kb downstream 6150 true Tp57577_TGAC_v2_LG1: 7333167-7339316 Trifolium pratense
Tp57577_TGAC_v2_gene21609 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 7338817-7339316 Trifolium pratense
Tp57577_TGAC_v2_gene21609 1.0kb upstream 1.0kb upstream 6650 true Tp57577_TGAC_v2_LG1: 7332167-7338816 Trifolium pratense
Tp57577_TGAC_v2_gene21609 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 7332167-7333166 Trifolium pratense
Tp57577_TGAC_v2_gene21609 1.0kb downstream 1.0kb downstream 6650 true Tp57577_TGAC_v2_LG1: 7333167-7339816 Trifolium pratense
Tp57577_TGAC_v2_gene21609 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 7338817-7339816 Trifolium pratense
Tp57577_TGAC_v2_gene21609 2.0kb upstream 2.0kb upstream 7650 true Tp57577_TGAC_v2_LG1: 7331167-7338816 Trifolium pratense
Tp57577_TGAC_v2_gene21609 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 7331167-7333166 Trifolium pratense
Tp57577_TGAC_v2_gene21609 2.0kb downstream 2.0kb downstream 7650 true Tp57577_TGAC_v2_LG1: 7333167-7340816 Trifolium pratense
Tp57577_TGAC_v2_gene21609 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 7338817-7340816 Trifolium pratense
Tp57577_TGAC_v2_gene21609 5.0kb upstream 5.0kb upstream 10650 true Tp57577_TGAC_v2_LG1: 7328167-7338816 Trifolium pratense
Tp57577_TGAC_v2_gene21609 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 7328167-7333166 Trifolium pratense
Tp57577_TGAC_v2_gene21609 5.0kb downstream 5.0kb downstream 10650 true Tp57577_TGAC_v2_LG1: 7333167-7343816 Trifolium pratense
Tp57577_TGAC_v2_gene21609 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 7338817-7343816 Trifolium pratense
Tp57577_TGAC_v2_gene21609 10.0kb upstream 10.0kb upstream 15650 true Tp57577_TGAC_v2_LG1: 7323167-7338816 Trifolium pratense
Tp57577_TGAC_v2_gene21609 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 7323167-7333166 Trifolium pratense
Tp57577_TGAC_v2_gene21609 10.0kb downstream 10.0kb downstream 15650 true Tp57577_TGAC_v2_LG1: 7333167-7348816 Trifolium pratense
Tp57577_TGAC_v2_gene21609 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 7338817-7348816 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297167 5265 Fabidae View MSA
124035929 5270 Rosid View MSA
123742951 5271 Pentapetalae View MSA
122788730 5272 Eudicot View MSA
122042529 5273 Angiosperm View MSA
123429001 5275 Viridiplantae View MSA
121349926 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain