Gene : Tp57577_TGAC_v2_gene11871 T. pratense v2
Defline:  (1 of 5) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase Genomic Order:  1556
Name:  ? Tp57577_TGAC_v2_gene11871 Secondary Identifier:  ? PAC:35990503
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6622 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11871 0.5kb upstream 0.5kb upstream 7417 true Tp57577_TGAC_v2_LG3: 12368081-12375497 Trifolium pratense
Tp57577_TGAC_v2_gene11871 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 12374998-12375497 Trifolium pratense
Tp57577_TGAC_v2_gene11871 0.5kb downstream 0.5kb downstream 7417 true Tp57577_TGAC_v2_LG3: 12367581-12374997 Trifolium pratense
Tp57577_TGAC_v2_gene11871 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 12367581-12368080 Trifolium pratense
Tp57577_TGAC_v2_gene11871 1.0kb upstream 1.0kb upstream 7917 true Tp57577_TGAC_v2_LG3: 12368081-12375997 Trifolium pratense
Tp57577_TGAC_v2_gene11871 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 12374998-12375997 Trifolium pratense
Tp57577_TGAC_v2_gene11871 1.0kb downstream 1.0kb downstream 7917 true Tp57577_TGAC_v2_LG3: 12367081-12374997 Trifolium pratense
Tp57577_TGAC_v2_gene11871 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 12367081-12368080 Trifolium pratense
Tp57577_TGAC_v2_gene11871 2.0kb upstream 2.0kb upstream 8917 true Tp57577_TGAC_v2_LG3: 12368081-12376997 Trifolium pratense
Tp57577_TGAC_v2_gene11871 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 12374998-12376997 Trifolium pratense
Tp57577_TGAC_v2_gene11871 2.0kb downstream 2.0kb downstream 8917 true Tp57577_TGAC_v2_LG3: 12366081-12374997 Trifolium pratense
Tp57577_TGAC_v2_gene11871 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 12366081-12368080 Trifolium pratense
Tp57577_TGAC_v2_gene11871 5.0kb upstream 5.0kb upstream 11917 true Tp57577_TGAC_v2_LG3: 12368081-12379997 Trifolium pratense
Tp57577_TGAC_v2_gene11871 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 12374998-12379997 Trifolium pratense
Tp57577_TGAC_v2_gene11871 5.0kb downstream 5.0kb downstream 11917 true Tp57577_TGAC_v2_LG3: 12363081-12374997 Trifolium pratense
Tp57577_TGAC_v2_gene11871 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 12363081-12368080 Trifolium pratense
Tp57577_TGAC_v2_gene11871 10.0kb upstream 10.0kb upstream 16917 true Tp57577_TGAC_v2_LG3: 12368081-12384997 Trifolium pratense
Tp57577_TGAC_v2_gene11871 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 12374998-12384997 Trifolium pratense
Tp57577_TGAC_v2_gene11871 10.0kb downstream 10.0kb downstream 16917 true Tp57577_TGAC_v2_LG3: 12358081-12374997 Trifolium pratense
Tp57577_TGAC_v2_gene11871 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 12358081-12368080 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310113 5265 Fabidae View MSA
124063017 5270 Rosid View MSA
123740730 5271 Pentapetalae View MSA
122788844 5272 Eudicot View MSA
122041588 5273 Angiosperm View MSA
121344484 5274 Embryophyte View MSA
123427454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain