Gene : Tp57577_TGAC_v2_gene10567 T. pratense v2
Defline:  (1 of 1) PF01426//PF05641//PF13966 - BAH domain (BAH) // Agenet domain (Agenet) // zinc-binding in reverse transcriptase (zf-RVT) Genomic Order:  24
Name:  ? Tp57577_TGAC_v2_gene10567 Secondary Identifier:  ? PAC:35958992
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene10567 0.5kb upstream 0.5kb upstream 9137 true Tp57577_TGAC_v2_scaf_215: 167896-177032 Trifolium pratense
Tp57577_TGAC_v2_gene10567 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_215: 167896-168395 Trifolium pratense
Tp57577_TGAC_v2_gene10567 0.5kb downstream 0.5kb downstream 9137 true Tp57577_TGAC_v2_scaf_215: 168396-177532 Trifolium pratense
Tp57577_TGAC_v2_gene10567 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_215: 177033-177532 Trifolium pratense
Tp57577_TGAC_v2_gene10567 1.0kb upstream 1.0kb upstream 9637 true Tp57577_TGAC_v2_scaf_215: 167396-177032 Trifolium pratense
Tp57577_TGAC_v2_gene10567 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_215: 167396-168395 Trifolium pratense
Tp57577_TGAC_v2_gene10567 1.0kb downstream 1.0kb downstream 9637 true Tp57577_TGAC_v2_scaf_215: 168396-178032 Trifolium pratense
Tp57577_TGAC_v2_gene10567 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_215: 177033-178032 Trifolium pratense
Tp57577_TGAC_v2_gene10567 2.0kb upstream 2.0kb upstream 10637 true Tp57577_TGAC_v2_scaf_215: 166396-177032 Trifolium pratense
Tp57577_TGAC_v2_gene10567 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_215: 166396-168395 Trifolium pratense
Tp57577_TGAC_v2_gene10567 2.0kb downstream 2.0kb downstream 10637 true Tp57577_TGAC_v2_scaf_215: 168396-179032 Trifolium pratense
Tp57577_TGAC_v2_gene10567 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_215: 177033-179032 Trifolium pratense
Tp57577_TGAC_v2_gene10567 5.0kb upstream 5.0kb upstream 13637 true Tp57577_TGAC_v2_scaf_215: 163396-177032 Trifolium pratense
Tp57577_TGAC_v2_gene10567 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_215: 163396-168395 Trifolium pratense
Tp57577_TGAC_v2_gene10567 5.0kb downstream 5.0kb downstream 13637 true Tp57577_TGAC_v2_scaf_215: 168396-182032 Trifolium pratense
Tp57577_TGAC_v2_gene10567 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_215: 177033-182032 Trifolium pratense
Tp57577_TGAC_v2_gene10567 10.0kb upstream 10.0kb upstream 18637 true Tp57577_TGAC_v2_scaf_215: 158396-177032 Trifolium pratense
Tp57577_TGAC_v2_gene10567 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_215: 158396-168395 Trifolium pratense
Tp57577_TGAC_v2_gene10567 10.0kb downstream 10.0kb downstream 18637 true Tp57577_TGAC_v2_scaf_215: 168396-187032 Trifolium pratense
Tp57577_TGAC_v2_gene10567 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_215: 177033-187032 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301755 5265 Fabidae View MSA
124050625 5270 Rosid View MSA
123742959 5271 Pentapetalae View MSA
122786842 5272 Eudicot View MSA
122047439 5273 Angiosperm View MSA
121349027 5274 Embryophyte View MSA
123381130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain