Gene : Tp57577_TGAC_v2_gene21005 T. pratense v2
Defline:  (1 of 1) PF00120//PF04909 - Glutamine synthetase, catalytic domain (Gln-synt_C) // Amidohydrolase (Amidohydro_2) Genomic Order:  1219
Name:  ? Tp57577_TGAC_v2_gene21005 Secondary Identifier:  ? PAC:35978340
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLNSYN-PWY Trifolium pratense pathologic  
Tpratense PWY-3282 Trifolium pratense pathologic  
Tpratense PWY-381 Trifolium pratense pathologic  
Tpratense PWY-6549 Trifolium pratense pathologic  
Tpratense PWY-6963 Trifolium pratense pathologic  
Tpratense PWY-6964 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21005 0.5kb upstream 0.5kb upstream 4041 true Tp57577_TGAC_v2_LG1: 10036078-10040118 Trifolium pratense
Tp57577_TGAC_v2_gene21005 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 10036078-10036577 Trifolium pratense
Tp57577_TGAC_v2_gene21005 0.5kb downstream 0.5kb downstream 4041 true Tp57577_TGAC_v2_LG1: 10036578-10040618 Trifolium pratense
Tp57577_TGAC_v2_gene21005 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 10040119-10040618 Trifolium pratense
Tp57577_TGAC_v2_gene21005 1.0kb upstream 1.0kb upstream 4541 true Tp57577_TGAC_v2_LG1: 10035578-10040118 Trifolium pratense
Tp57577_TGAC_v2_gene21005 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 10035578-10036577 Trifolium pratense
Tp57577_TGAC_v2_gene21005 1.0kb downstream 1.0kb downstream 4541 true Tp57577_TGAC_v2_LG1: 10036578-10041118 Trifolium pratense
Tp57577_TGAC_v2_gene21005 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 10040119-10041118 Trifolium pratense
Tp57577_TGAC_v2_gene21005 2.0kb upstream 2.0kb upstream 5541 true Tp57577_TGAC_v2_LG1: 10034578-10040118 Trifolium pratense
Tp57577_TGAC_v2_gene21005 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 10034578-10036577 Trifolium pratense
Tp57577_TGAC_v2_gene21005 2.0kb downstream 2.0kb downstream 5541 true Tp57577_TGAC_v2_LG1: 10036578-10042118 Trifolium pratense
Tp57577_TGAC_v2_gene21005 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 10040119-10042118 Trifolium pratense
Tp57577_TGAC_v2_gene21005 5.0kb upstream 5.0kb upstream 8541 true Tp57577_TGAC_v2_LG1: 10031578-10040118 Trifolium pratense
Tp57577_TGAC_v2_gene21005 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 10031578-10036577 Trifolium pratense
Tp57577_TGAC_v2_gene21005 5.0kb downstream 5.0kb downstream 8541 true Tp57577_TGAC_v2_LG1: 10036578-10045118 Trifolium pratense
Tp57577_TGAC_v2_gene21005 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 10040119-10045118 Trifolium pratense
Tp57577_TGAC_v2_gene21005 10.0kb upstream 10.0kb upstream 13541 true Tp57577_TGAC_v2_LG1: 10026578-10040118 Trifolium pratense
Tp57577_TGAC_v2_gene21005 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 10026578-10036577 Trifolium pratense
Tp57577_TGAC_v2_gene21005 10.0kb downstream 10.0kb downstream 13541 true Tp57577_TGAC_v2_LG1: 10036578-10050118 Trifolium pratense
Tp57577_TGAC_v2_gene21005 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 10040119-10050118 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122289477 5265 Fabidae View MSA
124062784 5270 Rosid View MSA
123749163 5271 Pentapetalae View MSA
122791802 5272 Eudicot View MSA
122046045 5273 Angiosperm View MSA
121348529 5274 Embryophyte View MSA
123428524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain