Gene : Tp57577_TGAC_v2_gene135 T. pratense v2
Defline:  (1 of 1) K02083 - allantoate deiminase (allC) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene135 Secondary Identifier:  ? PAC:35986789
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5692 Trifolium pratense pathologic  
Tpratense PWY-5698 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene135 0.5kb upstream 0.5kb upstream 5402 true Tp57577_TGAC_v2_scaf_2175: 583-5984 Trifolium pratense
Tp57577_TGAC_v2_gene135 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_2175: 5485-5984 Trifolium pratense
Tp57577_TGAC_v2_gene135 0.5kb downstream 0.5kb downstream 5402 true Tp57577_TGAC_v2_scaf_2175: 83-5484 Trifolium pratense
Tp57577_TGAC_v2_gene135 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_2175: 83-582 Trifolium pratense
Tp57577_TGAC_v2_gene135 1.0kb upstream 1.0kb upstream 5902 true Tp57577_TGAC_v2_scaf_2175: 583-6484 Trifolium pratense
Tp57577_TGAC_v2_gene135 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_2175: 5485-6484 Trifolium pratense
Tp57577_TGAC_v2_gene135 1.0kb downstream 1.0kb downstream 5484 true Tp57577_TGAC_v2_scaf_2175: 1-5484 Trifolium pratense
Tp57577_TGAC_v2_gene135 1.0kb downstream 1.0kb downstream 582 false Tp57577_TGAC_v2_scaf_2175: 1-582 Trifolium pratense
Tp57577_TGAC_v2_gene135 2.0kb upstream 2.0kb upstream 6902 true Tp57577_TGAC_v2_scaf_2175: 583-7484 Trifolium pratense
Tp57577_TGAC_v2_gene135 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_2175: 5485-7484 Trifolium pratense
Tp57577_TGAC_v2_gene135 2.0kb downstream 2.0kb downstream 5484 true Tp57577_TGAC_v2_scaf_2175: 1-5484 Trifolium pratense
Tp57577_TGAC_v2_gene135 2.0kb downstream 2.0kb downstream 582 false Tp57577_TGAC_v2_scaf_2175: 1-582 Trifolium pratense
Tp57577_TGAC_v2_gene135 5.0kb upstream 5.0kb upstream 7120 true Tp57577_TGAC_v2_scaf_2175: 583-7702 Trifolium pratense
Tp57577_TGAC_v2_gene135 5.0kb upstream 5.0kb upstream 2218 false Tp57577_TGAC_v2_scaf_2175: 5485-7702 Trifolium pratense
Tp57577_TGAC_v2_gene135 5.0kb downstream 5.0kb downstream 5484 true Tp57577_TGAC_v2_scaf_2175: 1-5484 Trifolium pratense
Tp57577_TGAC_v2_gene135 5.0kb downstream 5.0kb downstream 582 false Tp57577_TGAC_v2_scaf_2175: 1-582 Trifolium pratense
Tp57577_TGAC_v2_gene135 10.0kb upstream 10.0kb upstream 7120 true Tp57577_TGAC_v2_scaf_2175: 583-7702 Trifolium pratense
Tp57577_TGAC_v2_gene135 10.0kb upstream 10.0kb upstream 2218 false Tp57577_TGAC_v2_scaf_2175: 5485-7702 Trifolium pratense
Tp57577_TGAC_v2_gene135 10.0kb downstream 10.0kb downstream 5484 true Tp57577_TGAC_v2_scaf_2175: 1-5484 Trifolium pratense
Tp57577_TGAC_v2_gene135 10.0kb downstream 10.0kb downstream 582 false Tp57577_TGAC_v2_scaf_2175: 1-582 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303466 5265 Fabidae View MSA
124067996 5270 Rosid View MSA
123737460 5271 Pentapetalae View MSA
122786407 5272 Eudicot View MSA
122042851 5273 Angiosperm View MSA
121347111 5274 Embryophyte View MSA
123424099 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain