Gene : Tp57577_TGAC_v2_gene2469 T. pratense v2
Defline:  (1 of 1) PTHR11451:SF21 - BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASE Genomic Order:  89
Name:  ? Tp57577_TGAC_v2_gene2469 Secondary Identifier:  ? PAC:35979103
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRNA-CHARGING-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2469 0.5kb upstream 0.5kb upstream 5625 true Tp57577_TGAC_v2_LG1: 592645-598269 Trifolium pratense
Tp57577_TGAC_v2_gene2469 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 592645-593144 Trifolium pratense
Tp57577_TGAC_v2_gene2469 0.5kb downstream 0.5kb downstream 5625 true Tp57577_TGAC_v2_LG1: 593145-598769 Trifolium pratense
Tp57577_TGAC_v2_gene2469 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 598270-598769 Trifolium pratense
Tp57577_TGAC_v2_gene2469 1.0kb upstream 1.0kb upstream 6125 true Tp57577_TGAC_v2_LG1: 592145-598269 Trifolium pratense
Tp57577_TGAC_v2_gene2469 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 592145-593144 Trifolium pratense
Tp57577_TGAC_v2_gene2469 1.0kb downstream 1.0kb downstream 6125 true Tp57577_TGAC_v2_LG1: 593145-599269 Trifolium pratense
Tp57577_TGAC_v2_gene2469 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 598270-599269 Trifolium pratense
Tp57577_TGAC_v2_gene2469 2.0kb upstream 2.0kb upstream 7125 true Tp57577_TGAC_v2_LG1: 591145-598269 Trifolium pratense
Tp57577_TGAC_v2_gene2469 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 591145-593144 Trifolium pratense
Tp57577_TGAC_v2_gene2469 2.0kb downstream 2.0kb downstream 7125 true Tp57577_TGAC_v2_LG1: 593145-600269 Trifolium pratense
Tp57577_TGAC_v2_gene2469 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 598270-600269 Trifolium pratense
Tp57577_TGAC_v2_gene2469 5.0kb upstream 5.0kb upstream 10125 true Tp57577_TGAC_v2_LG1: 588145-598269 Trifolium pratense
Tp57577_TGAC_v2_gene2469 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 588145-593144 Trifolium pratense
Tp57577_TGAC_v2_gene2469 5.0kb downstream 5.0kb downstream 10125 true Tp57577_TGAC_v2_LG1: 593145-603269 Trifolium pratense
Tp57577_TGAC_v2_gene2469 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 598270-603269 Trifolium pratense
Tp57577_TGAC_v2_gene2469 10.0kb upstream 10.0kb upstream 15125 true Tp57577_TGAC_v2_LG1: 583145-598269 Trifolium pratense
Tp57577_TGAC_v2_gene2469 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 583145-593144 Trifolium pratense
Tp57577_TGAC_v2_gene2469 10.0kb downstream 10.0kb downstream 15125 true Tp57577_TGAC_v2_LG1: 593145-608269 Trifolium pratense
Tp57577_TGAC_v2_gene2469 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 598270-608269 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308357 5265 Fabidae View MSA
124064223 5270 Rosid View MSA
123739091 5271 Pentapetalae View MSA
122787738 5272 Eudicot View MSA
122046547 5273 Angiosperm View MSA
121346675 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain