Gene : Tp57577_TGAC_v2_gene2474 T. pratense v2
Defline:  (1 of 1) 4.1.1.33 - Diphosphomevalonate decarboxylase / Mevalonate pyrophosphate decarboxylase Genomic Order:  19
Name:  ? Tp57577_TGAC_v2_gene2474 Secondary Identifier:  ? PAC:35978980
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5910 Trifolium pratense pathologic  
Tpratense PWY-922 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2474 0.5kb upstream 0.5kb upstream 5048 true Tp57577_TGAC_v2_LG1: 109542-114589 Trifolium pratense
Tp57577_TGAC_v2_gene2474 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 114090-114589 Trifolium pratense
Tp57577_TGAC_v2_gene2474 0.5kb downstream 0.5kb downstream 5048 true Tp57577_TGAC_v2_LG1: 109042-114089 Trifolium pratense
Tp57577_TGAC_v2_gene2474 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 109042-109541 Trifolium pratense
Tp57577_TGAC_v2_gene2474 1.0kb upstream 1.0kb upstream 5548 true Tp57577_TGAC_v2_LG1: 109542-115089 Trifolium pratense
Tp57577_TGAC_v2_gene2474 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 114090-115089 Trifolium pratense
Tp57577_TGAC_v2_gene2474 1.0kb downstream 1.0kb downstream 5548 true Tp57577_TGAC_v2_LG1: 108542-114089 Trifolium pratense
Tp57577_TGAC_v2_gene2474 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 108542-109541 Trifolium pratense
Tp57577_TGAC_v2_gene2474 2.0kb upstream 2.0kb upstream 6548 true Tp57577_TGAC_v2_LG1: 109542-116089 Trifolium pratense
Tp57577_TGAC_v2_gene2474 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 114090-116089 Trifolium pratense
Tp57577_TGAC_v2_gene2474 2.0kb downstream 2.0kb downstream 6548 true Tp57577_TGAC_v2_LG1: 107542-114089 Trifolium pratense
Tp57577_TGAC_v2_gene2474 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 107542-109541 Trifolium pratense
Tp57577_TGAC_v2_gene2474 5.0kb upstream 5.0kb upstream 9548 true Tp57577_TGAC_v2_LG1: 109542-119089 Trifolium pratense
Tp57577_TGAC_v2_gene2474 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 114090-119089 Trifolium pratense
Tp57577_TGAC_v2_gene2474 5.0kb downstream 5.0kb downstream 9548 true Tp57577_TGAC_v2_LG1: 104542-114089 Trifolium pratense
Tp57577_TGAC_v2_gene2474 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 104542-109541 Trifolium pratense
Tp57577_TGAC_v2_gene2474 10.0kb upstream 10.0kb upstream 14548 true Tp57577_TGAC_v2_LG1: 109542-124089 Trifolium pratense
Tp57577_TGAC_v2_gene2474 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 114090-124089 Trifolium pratense
Tp57577_TGAC_v2_gene2474 10.0kb downstream 10.0kb downstream 14548 true Tp57577_TGAC_v2_LG1: 99542-114089 Trifolium pratense
Tp57577_TGAC_v2_gene2474 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 99542-109541 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040965 5273 Angiosperm View MSA
122304155 5265 Fabidae View MSA
124066077 5270 Rosid View MSA
123742848 5271 Pentapetalae View MSA
122793764 5272 Eudicot View MSA
121347307 5274 Embryophyte View MSA
123380524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain