Gene : Tp57577_TGAC_v2_gene23565 T. pratense v2

Defline:  (1 of 2) PTHR33102:SF3 - DVL13-RELATED Genomic Order:  2772
Name:  ? Tp57577_TGAC_v2_gene23565 Secondary Identifier:  ? PAC:35989811

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23565 0.5kb upstream 0.5kb upstream 1099 true Tp57577_TGAC_v2_LG3: 23390411-23391509 Trifolium pratense
Tp57577_TGAC_v2_gene23565 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 23391010-23391509 Trifolium pratense
Tp57577_TGAC_v2_gene23565 0.5kb downstream 0.5kb downstream 1099 true Tp57577_TGAC_v2_LG3: 23389911-23391009 Trifolium pratense
Tp57577_TGAC_v2_gene23565 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 23389911-23390410 Trifolium pratense
Tp57577_TGAC_v2_gene23565 1.0kb upstream 1.0kb upstream 1599 true Tp57577_TGAC_v2_LG3: 23390411-23392009 Trifolium pratense
Tp57577_TGAC_v2_gene23565 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 23391010-23392009 Trifolium pratense
Tp57577_TGAC_v2_gene23565 1.0kb downstream 1.0kb downstream 1599 true Tp57577_TGAC_v2_LG3: 23389411-23391009 Trifolium pratense
Tp57577_TGAC_v2_gene23565 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 23389411-23390410 Trifolium pratense
Tp57577_TGAC_v2_gene23565 2.0kb upstream 2.0kb upstream 2599 true Tp57577_TGAC_v2_LG3: 23390411-23393009 Trifolium pratense
Tp57577_TGAC_v2_gene23565 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 23391010-23393009 Trifolium pratense
Tp57577_TGAC_v2_gene23565 2.0kb downstream 2.0kb downstream 2599 true Tp57577_TGAC_v2_LG3: 23388411-23391009 Trifolium pratense
Tp57577_TGAC_v2_gene23565 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 23388411-23390410 Trifolium pratense
Tp57577_TGAC_v2_gene23565 5.0kb upstream 5.0kb upstream 5599 true Tp57577_TGAC_v2_LG3: 23390411-23396009 Trifolium pratense
Tp57577_TGAC_v2_gene23565 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 23391010-23396009 Trifolium pratense
Tp57577_TGAC_v2_gene23565 5.0kb downstream 5.0kb downstream 5599 true Tp57577_TGAC_v2_LG3: 23385411-23391009 Trifolium pratense
Tp57577_TGAC_v2_gene23565 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 23385411-23390410 Trifolium pratense
Tp57577_TGAC_v2_gene23565 10.0kb upstream 10.0kb upstream 10599 true Tp57577_TGAC_v2_LG3: 23390411-23401009 Trifolium pratense
Tp57577_TGAC_v2_gene23565 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 23391010-23401009 Trifolium pratense
Tp57577_TGAC_v2_gene23565 10.0kb downstream 10.0kb downstream 10599 true Tp57577_TGAC_v2_LG3: 23380411-23391009 Trifolium pratense
Tp57577_TGAC_v2_gene23565 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 23380411-23390410 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303908 5265 Fabidae View MSA
124068488 5270 Rosid View MSA
123751653 5271 Pentapetalae View MSA
122795798 5272 Eudicot View MSA
122048565 5273 Angiosperm View MSA
121346075 5274 Embryophyte View MSA
123380321 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain