Gene : Tp57577_TGAC_v2_gene2175 T. pratense v2
Defline:  (1 of 1) PTHR10072:SF48 - IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC Genomic Order:  467
Name:  ? Tp57577_TGAC_v2_gene2175 Secondary Identifier:  ? PAC:35989113
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2175 0.5kb upstream 0.5kb upstream 2796 true Tp57577_TGAC_v2_LG3: 3625836-3628631 Trifolium pratense
Tp57577_TGAC_v2_gene2175 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 3628132-3628631 Trifolium pratense
Tp57577_TGAC_v2_gene2175 0.5kb downstream 0.5kb downstream 2796 true Tp57577_TGAC_v2_LG3: 3625336-3628131 Trifolium pratense
Tp57577_TGAC_v2_gene2175 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 3625336-3625835 Trifolium pratense
Tp57577_TGAC_v2_gene2175 1.0kb upstream 1.0kb upstream 3296 true Tp57577_TGAC_v2_LG3: 3625836-3629131 Trifolium pratense
Tp57577_TGAC_v2_gene2175 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 3628132-3629131 Trifolium pratense
Tp57577_TGAC_v2_gene2175 1.0kb downstream 1.0kb downstream 3296 true Tp57577_TGAC_v2_LG3: 3624836-3628131 Trifolium pratense
Tp57577_TGAC_v2_gene2175 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 3624836-3625835 Trifolium pratense
Tp57577_TGAC_v2_gene2175 2.0kb upstream 2.0kb upstream 4296 true Tp57577_TGAC_v2_LG3: 3625836-3630131 Trifolium pratense
Tp57577_TGAC_v2_gene2175 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 3628132-3630131 Trifolium pratense
Tp57577_TGAC_v2_gene2175 2.0kb downstream 2.0kb downstream 4296 true Tp57577_TGAC_v2_LG3: 3623836-3628131 Trifolium pratense
Tp57577_TGAC_v2_gene2175 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 3623836-3625835 Trifolium pratense
Tp57577_TGAC_v2_gene2175 5.0kb upstream 5.0kb upstream 7296 true Tp57577_TGAC_v2_LG3: 3625836-3633131 Trifolium pratense
Tp57577_TGAC_v2_gene2175 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 3628132-3633131 Trifolium pratense
Tp57577_TGAC_v2_gene2175 5.0kb downstream 5.0kb downstream 7296 true Tp57577_TGAC_v2_LG3: 3620836-3628131 Trifolium pratense
Tp57577_TGAC_v2_gene2175 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 3620836-3625835 Trifolium pratense
Tp57577_TGAC_v2_gene2175 10.0kb upstream 10.0kb upstream 12296 true Tp57577_TGAC_v2_LG3: 3625836-3638131 Trifolium pratense
Tp57577_TGAC_v2_gene2175 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 3628132-3638131 Trifolium pratense
Tp57577_TGAC_v2_gene2175 10.0kb downstream 10.0kb downstream 12296 true Tp57577_TGAC_v2_LG3: 3615836-3628131 Trifolium pratense
Tp57577_TGAC_v2_gene2175 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 3615836-3625835 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306039 5265 Fabidae View MSA
124065003 5270 Rosid View MSA
123740000 5271 Pentapetalae View MSA
122792600 5272 Eudicot View MSA
122046362 5273 Angiosperm View MSA
121346119 5274 Embryophyte View MSA
123427871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain