Gene : Tp57577_TGAC_v2_gene21161 T. pratense v2
Defline:  (1 of 1) PTHR31956:SF9 - NON-SPECIFIC PHOSPHOLIPASE C1 Genomic Order:  3067
Name:  ? Tp57577_TGAC_v2_gene21161 Secondary Identifier:  ? PAC:35987348
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LIPASYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21161 0.5kb upstream 0.5kb upstream 4735 true Tp57577_TGAC_v2_LG3: 25931685-25936419 Trifolium pratense
Tp57577_TGAC_v2_gene21161 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 25935920-25936419 Trifolium pratense
Tp57577_TGAC_v2_gene21161 0.5kb downstream 0.5kb downstream 4735 true Tp57577_TGAC_v2_LG3: 25931185-25935919 Trifolium pratense
Tp57577_TGAC_v2_gene21161 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 25931185-25931684 Trifolium pratense
Tp57577_TGAC_v2_gene21161 1.0kb upstream 1.0kb upstream 5235 true Tp57577_TGAC_v2_LG3: 25931685-25936919 Trifolium pratense
Tp57577_TGAC_v2_gene21161 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 25935920-25936919 Trifolium pratense
Tp57577_TGAC_v2_gene21161 1.0kb downstream 1.0kb downstream 5235 true Tp57577_TGAC_v2_LG3: 25930685-25935919 Trifolium pratense
Tp57577_TGAC_v2_gene21161 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 25930685-25931684 Trifolium pratense
Tp57577_TGAC_v2_gene21161 2.0kb upstream 2.0kb upstream 6235 true Tp57577_TGAC_v2_LG3: 25931685-25937919 Trifolium pratense
Tp57577_TGAC_v2_gene21161 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 25935920-25937919 Trifolium pratense
Tp57577_TGAC_v2_gene21161 2.0kb downstream 2.0kb downstream 6235 true Tp57577_TGAC_v2_LG3: 25929685-25935919 Trifolium pratense
Tp57577_TGAC_v2_gene21161 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 25929685-25931684 Trifolium pratense
Tp57577_TGAC_v2_gene21161 5.0kb upstream 5.0kb upstream 9235 true Tp57577_TGAC_v2_LG3: 25931685-25940919 Trifolium pratense
Tp57577_TGAC_v2_gene21161 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 25935920-25940919 Trifolium pratense
Tp57577_TGAC_v2_gene21161 5.0kb downstream 5.0kb downstream 9235 true Tp57577_TGAC_v2_LG3: 25926685-25935919 Trifolium pratense
Tp57577_TGAC_v2_gene21161 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 25926685-25931684 Trifolium pratense
Tp57577_TGAC_v2_gene21161 10.0kb upstream 10.0kb upstream 14235 true Tp57577_TGAC_v2_LG3: 25931685-25945919 Trifolium pratense
Tp57577_TGAC_v2_gene21161 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 25935920-25945919 Trifolium pratense
Tp57577_TGAC_v2_gene21161 10.0kb downstream 10.0kb downstream 14235 true Tp57577_TGAC_v2_LG3: 25921685-25935919 Trifolium pratense
Tp57577_TGAC_v2_gene21161 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 25921685-25931684 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308644 5265 Fabidae View MSA
124069439 5270 Rosid View MSA
123747870 5271 Pentapetalae View MSA
122794639 5272 Eudicot View MSA
122048233 5273 Angiosperm View MSA
121345811 5274 Embryophyte View MSA
123380272 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain