Gene : Tp57577_TGAC_v2_gene16102 T. pratense v2
Defline:  (1 of 4) K07407 - alpha-galactosidase (E3.2.1.22B, galA, rafA) Genomic Order:  2543
Name:  ? Tp57577_TGAC_v2_gene16102 Secondary Identifier:  ? PAC:35987140
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY0-1301 Trifolium pratense pathologic  
Tpratense PWY-6527 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16102 0.5kb upstream 0.5kb upstream 5862 true Tp57577_TGAC_v2_LG3: 21541177-21547038 Trifolium pratense
Tp57577_TGAC_v2_gene16102 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 21546539-21547038 Trifolium pratense
Tp57577_TGAC_v2_gene16102 0.5kb downstream 0.5kb downstream 5862 true Tp57577_TGAC_v2_LG3: 21540677-21546538 Trifolium pratense
Tp57577_TGAC_v2_gene16102 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 21540677-21541176 Trifolium pratense
Tp57577_TGAC_v2_gene16102 1.0kb upstream 1.0kb upstream 6362 true Tp57577_TGAC_v2_LG3: 21541177-21547538 Trifolium pratense
Tp57577_TGAC_v2_gene16102 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 21546539-21547538 Trifolium pratense
Tp57577_TGAC_v2_gene16102 1.0kb downstream 1.0kb downstream 6362 true Tp57577_TGAC_v2_LG3: 21540177-21546538 Trifolium pratense
Tp57577_TGAC_v2_gene16102 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 21540177-21541176 Trifolium pratense
Tp57577_TGAC_v2_gene16102 2.0kb upstream 2.0kb upstream 7362 true Tp57577_TGAC_v2_LG3: 21541177-21548538 Trifolium pratense
Tp57577_TGAC_v2_gene16102 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 21546539-21548538 Trifolium pratense
Tp57577_TGAC_v2_gene16102 2.0kb downstream 2.0kb downstream 7362 true Tp57577_TGAC_v2_LG3: 21539177-21546538 Trifolium pratense
Tp57577_TGAC_v2_gene16102 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 21539177-21541176 Trifolium pratense
Tp57577_TGAC_v2_gene16102 5.0kb upstream 5.0kb upstream 10362 true Tp57577_TGAC_v2_LG3: 21541177-21551538 Trifolium pratense
Tp57577_TGAC_v2_gene16102 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 21546539-21551538 Trifolium pratense
Tp57577_TGAC_v2_gene16102 5.0kb downstream 5.0kb downstream 10362 true Tp57577_TGAC_v2_LG3: 21536177-21546538 Trifolium pratense
Tp57577_TGAC_v2_gene16102 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 21536177-21541176 Trifolium pratense
Tp57577_TGAC_v2_gene16102 10.0kb upstream 10.0kb upstream 15362 true Tp57577_TGAC_v2_LG3: 21541177-21556538 Trifolium pratense
Tp57577_TGAC_v2_gene16102 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 21546539-21556538 Trifolium pratense
Tp57577_TGAC_v2_gene16102 10.0kb downstream 10.0kb downstream 15362 true Tp57577_TGAC_v2_LG3: 21531177-21546538 Trifolium pratense
Tp57577_TGAC_v2_gene16102 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 21531177-21541176 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304427 5265 Fabidae View MSA
124073438 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain