Gene : Tp57577_TGAC_v2_gene2421 T. pratense v2

Defline:  (1 of 1) K12868 - pre-mRNA-splicing factor SYF2 (SYF2) Genomic Order:  36
Name:  ? Tp57577_TGAC_v2_gene2421 Secondary Identifier:  ? PAC:35979400

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2421 0.5kb upstream 0.5kb upstream 3402 true Tp57577_TGAC_v2_LG1: 247799-251200 Trifolium pratense
Tp57577_TGAC_v2_gene2421 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 250701-251200 Trifolium pratense
Tp57577_TGAC_v2_gene2421 0.5kb downstream 0.5kb downstream 3402 true Tp57577_TGAC_v2_LG1: 247299-250700 Trifolium pratense
Tp57577_TGAC_v2_gene2421 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 247299-247798 Trifolium pratense
Tp57577_TGAC_v2_gene2421 1.0kb upstream 1.0kb upstream 3902 true Tp57577_TGAC_v2_LG1: 247799-251700 Trifolium pratense
Tp57577_TGAC_v2_gene2421 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 250701-251700 Trifolium pratense
Tp57577_TGAC_v2_gene2421 1.0kb downstream 1.0kb downstream 3902 true Tp57577_TGAC_v2_LG1: 246799-250700 Trifolium pratense
Tp57577_TGAC_v2_gene2421 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 246799-247798 Trifolium pratense
Tp57577_TGAC_v2_gene2421 2.0kb upstream 2.0kb upstream 4902 true Tp57577_TGAC_v2_LG1: 247799-252700 Trifolium pratense
Tp57577_TGAC_v2_gene2421 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 250701-252700 Trifolium pratense
Tp57577_TGAC_v2_gene2421 2.0kb downstream 2.0kb downstream 4902 true Tp57577_TGAC_v2_LG1: 245799-250700 Trifolium pratense
Tp57577_TGAC_v2_gene2421 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 245799-247798 Trifolium pratense
Tp57577_TGAC_v2_gene2421 5.0kb upstream 5.0kb upstream 7902 true Tp57577_TGAC_v2_LG1: 247799-255700 Trifolium pratense
Tp57577_TGAC_v2_gene2421 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 250701-255700 Trifolium pratense
Tp57577_TGAC_v2_gene2421 5.0kb downstream 5.0kb downstream 7902 true Tp57577_TGAC_v2_LG1: 242799-250700 Trifolium pratense
Tp57577_TGAC_v2_gene2421 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 242799-247798 Trifolium pratense
Tp57577_TGAC_v2_gene2421 10.0kb upstream 10.0kb upstream 12902 true Tp57577_TGAC_v2_LG1: 247799-260700 Trifolium pratense
Tp57577_TGAC_v2_gene2421 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 250701-260700 Trifolium pratense
Tp57577_TGAC_v2_gene2421 10.0kb downstream 10.0kb downstream 12902 true Tp57577_TGAC_v2_LG1: 237799-250700 Trifolium pratense
Tp57577_TGAC_v2_gene2421 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 237799-247798 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300599 5265 Fabidae View MSA
124068841 5270 Rosid View MSA
123740835 5271 Pentapetalae View MSA
122793890 5272 Eudicot View MSA
122049804 5273 Angiosperm View MSA
121347073 5274 Embryophyte View MSA
123424870 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain