Gene : Tp57577_TGAC_v2_gene37415 T. pratense v2
Defline:  (1 of 2) PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  881
Name:  ? Tp57577_TGAC_v2_gene37415 Secondary Identifier:  ? PAC:35989070
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene37415 0.5kb upstream 0.5kb upstream 2105 true Tp57577_TGAC_v2_LG3: 6648351-6650455 Trifolium pratense
Tp57577_TGAC_v2_gene37415 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 6648351-6648850 Trifolium pratense
Tp57577_TGAC_v2_gene37415 0.5kb downstream 0.5kb downstream 2105 true Tp57577_TGAC_v2_LG3: 6648851-6650955 Trifolium pratense
Tp57577_TGAC_v2_gene37415 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 6650456-6650955 Trifolium pratense
Tp57577_TGAC_v2_gene37415 1.0kb upstream 1.0kb upstream 2605 true Tp57577_TGAC_v2_LG3: 6647851-6650455 Trifolium pratense
Tp57577_TGAC_v2_gene37415 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 6647851-6648850 Trifolium pratense
Tp57577_TGAC_v2_gene37415 1.0kb downstream 1.0kb downstream 2605 true Tp57577_TGAC_v2_LG3: 6648851-6651455 Trifolium pratense
Tp57577_TGAC_v2_gene37415 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 6650456-6651455 Trifolium pratense
Tp57577_TGAC_v2_gene37415 2.0kb upstream 2.0kb upstream 3605 true Tp57577_TGAC_v2_LG3: 6646851-6650455 Trifolium pratense
Tp57577_TGAC_v2_gene37415 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 6646851-6648850 Trifolium pratense
Tp57577_TGAC_v2_gene37415 2.0kb downstream 2.0kb downstream 3605 true Tp57577_TGAC_v2_LG3: 6648851-6652455 Trifolium pratense
Tp57577_TGAC_v2_gene37415 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 6650456-6652455 Trifolium pratense
Tp57577_TGAC_v2_gene37415 5.0kb upstream 5.0kb upstream 6605 true Tp57577_TGAC_v2_LG3: 6643851-6650455 Trifolium pratense
Tp57577_TGAC_v2_gene37415 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 6643851-6648850 Trifolium pratense
Tp57577_TGAC_v2_gene37415 5.0kb downstream 5.0kb downstream 6605 true Tp57577_TGAC_v2_LG3: 6648851-6655455 Trifolium pratense
Tp57577_TGAC_v2_gene37415 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 6650456-6655455 Trifolium pratense
Tp57577_TGAC_v2_gene37415 10.0kb upstream 10.0kb upstream 11605 true Tp57577_TGAC_v2_LG3: 6638851-6650455 Trifolium pratense
Tp57577_TGAC_v2_gene37415 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 6638851-6648850 Trifolium pratense
Tp57577_TGAC_v2_gene37415 10.0kb downstream 10.0kb downstream 11605 true Tp57577_TGAC_v2_LG3: 6648851-6660455 Trifolium pratense
Tp57577_TGAC_v2_gene37415 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 6650456-6660455 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312368 5265 Fabidae View MSA
124071729 5270 Rosid View MSA
123744205 5271 Pentapetalae View MSA
122785881 5272 Eudicot View MSA
122041845 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain