Gene : Tp57577_TGAC_v2_gene3411 T. pratense v2
Defline:  (1 of 1) PTHR11349:SF53 - NUCLEOSIDE DIPHOSPHATE KINASE-RELATED Genomic Order:  577
Name:  ? Tp57577_TGAC_v2_gene3411 Secondary Identifier:  ? PAC:35990558
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Sequence Feature Displayer

Ontology Annotation Displayer

21 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY0-162 Trifolium pratense pathologic  
Tpratense PWY-6126 Trifolium pratense pathologic  
Tpratense PWY-6545 Trifolium pratense pathologic  
Tpratense PWY-7176 Trifolium pratense pathologic  
Tpratense PWY-7184 Trifolium pratense pathologic  
Tpratense PWY-7196 Trifolium pratense pathologic  
Tpratense PWY-7197 Trifolium pratense pathologic  
Tpratense PWY-7200 Trifolium pratense pathologic  
Tpratense PWY-7205 Trifolium pratense pathologic  
Tpratense PWY-7208 Trifolium pratense pathologic  
Tpratense PWY-7210 Trifolium pratense pathologic  
Tpratense PWY-7211 Trifolium pratense pathologic  
Tpratense PWY-7220 Trifolium pratense pathologic  
Tpratense PWY-7221 Trifolium pratense pathologic  
Tpratense PWY-7222 Trifolium pratense pathologic  
Tpratense PWY-7224 Trifolium pratense pathologic  
Tpratense PWY-7226 Trifolium pratense pathologic  
Tpratense PWY-7227 Trifolium pratense pathologic  
Tpratense PWY-7228 Trifolium pratense pathologic  
Tpratense PWY-7229 Trifolium pratense pathologic  
Tpratense PWY-841 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3411 0.5kb upstream 0.5kb upstream 4425 true Tp57577_TGAC_v2_LG3: 4376859-4381283 Trifolium pratense
Tp57577_TGAC_v2_gene3411 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 4376859-4377358 Trifolium pratense
Tp57577_TGAC_v2_gene3411 0.5kb downstream 0.5kb downstream 4425 true Tp57577_TGAC_v2_LG3: 4377359-4381783 Trifolium pratense
Tp57577_TGAC_v2_gene3411 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 4381284-4381783 Trifolium pratense
Tp57577_TGAC_v2_gene3411 1.0kb upstream 1.0kb upstream 4925 true Tp57577_TGAC_v2_LG3: 4376359-4381283 Trifolium pratense
Tp57577_TGAC_v2_gene3411 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 4376359-4377358 Trifolium pratense
Tp57577_TGAC_v2_gene3411 1.0kb downstream 1.0kb downstream 4925 true Tp57577_TGAC_v2_LG3: 4377359-4382283 Trifolium pratense
Tp57577_TGAC_v2_gene3411 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 4381284-4382283 Trifolium pratense
Tp57577_TGAC_v2_gene3411 2.0kb upstream 2.0kb upstream 5925 true Tp57577_TGAC_v2_LG3: 4375359-4381283 Trifolium pratense
Tp57577_TGAC_v2_gene3411 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 4375359-4377358 Trifolium pratense
Tp57577_TGAC_v2_gene3411 2.0kb downstream 2.0kb downstream 5925 true Tp57577_TGAC_v2_LG3: 4377359-4383283 Trifolium pratense
Tp57577_TGAC_v2_gene3411 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 4381284-4383283 Trifolium pratense
Tp57577_TGAC_v2_gene3411 5.0kb upstream 5.0kb upstream 8925 true Tp57577_TGAC_v2_LG3: 4372359-4381283 Trifolium pratense
Tp57577_TGAC_v2_gene3411 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 4372359-4377358 Trifolium pratense
Tp57577_TGAC_v2_gene3411 5.0kb downstream 5.0kb downstream 8925 true Tp57577_TGAC_v2_LG3: 4377359-4386283 Trifolium pratense
Tp57577_TGAC_v2_gene3411 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 4381284-4386283 Trifolium pratense
Tp57577_TGAC_v2_gene3411 10.0kb upstream 10.0kb upstream 13925 true Tp57577_TGAC_v2_LG3: 4367359-4381283 Trifolium pratense
Tp57577_TGAC_v2_gene3411 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 4367359-4377358 Trifolium pratense
Tp57577_TGAC_v2_gene3411 10.0kb downstream 10.0kb downstream 13925 true Tp57577_TGAC_v2_LG3: 4377359-4391283 Trifolium pratense
Tp57577_TGAC_v2_gene3411 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 4381284-4391283 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312585 5265 Fabidae View MSA
124068099 5270 Rosid View MSA
123749251 5271 Pentapetalae View MSA
122792257 5272 Eudicot View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain