Gene : Tp57577_TGAC_v2_gene3398 T. pratense v2
Defline:  (1 of 2) PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED Genomic Order:  595
Name:  ? Tp57577_TGAC_v2_gene3398 Secondary Identifier:  ? PAC:35987809
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3398 0.5kb upstream 0.5kb upstream 3630 true Tp57577_TGAC_v2_LG3: 4496140-4499769 Trifolium pratense
Tp57577_TGAC_v2_gene3398 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 4499270-4499769 Trifolium pratense
Tp57577_TGAC_v2_gene3398 0.5kb downstream 0.5kb downstream 3630 true Tp57577_TGAC_v2_LG3: 4495640-4499269 Trifolium pratense
Tp57577_TGAC_v2_gene3398 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 4495640-4496139 Trifolium pratense
Tp57577_TGAC_v2_gene3398 1.0kb upstream 1.0kb upstream 4130 true Tp57577_TGAC_v2_LG3: 4496140-4500269 Trifolium pratense
Tp57577_TGAC_v2_gene3398 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 4499270-4500269 Trifolium pratense
Tp57577_TGAC_v2_gene3398 1.0kb downstream 1.0kb downstream 4130 true Tp57577_TGAC_v2_LG3: 4495140-4499269 Trifolium pratense
Tp57577_TGAC_v2_gene3398 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 4495140-4496139 Trifolium pratense
Tp57577_TGAC_v2_gene3398 2.0kb upstream 2.0kb upstream 5130 true Tp57577_TGAC_v2_LG3: 4496140-4501269 Trifolium pratense
Tp57577_TGAC_v2_gene3398 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 4499270-4501269 Trifolium pratense
Tp57577_TGAC_v2_gene3398 2.0kb downstream 2.0kb downstream 5130 true Tp57577_TGAC_v2_LG3: 4494140-4499269 Trifolium pratense
Tp57577_TGAC_v2_gene3398 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 4494140-4496139 Trifolium pratense
Tp57577_TGAC_v2_gene3398 5.0kb upstream 5.0kb upstream 8130 true Tp57577_TGAC_v2_LG3: 4496140-4504269 Trifolium pratense
Tp57577_TGAC_v2_gene3398 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 4499270-4504269 Trifolium pratense
Tp57577_TGAC_v2_gene3398 5.0kb downstream 5.0kb downstream 8130 true Tp57577_TGAC_v2_LG3: 4491140-4499269 Trifolium pratense
Tp57577_TGAC_v2_gene3398 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 4491140-4496139 Trifolium pratense
Tp57577_TGAC_v2_gene3398 10.0kb upstream 10.0kb upstream 13130 true Tp57577_TGAC_v2_LG3: 4496140-4509269 Trifolium pratense
Tp57577_TGAC_v2_gene3398 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 4499270-4509269 Trifolium pratense
Tp57577_TGAC_v2_gene3398 10.0kb downstream 10.0kb downstream 13130 true Tp57577_TGAC_v2_LG3: 4486140-4499269 Trifolium pratense
Tp57577_TGAC_v2_gene3398 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 4486140-4496139 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310408 5265 Fabidae View MSA
124073525 5270 Rosid View MSA
123749217 5271 Pentapetalae View MSA
122792770 5272 Eudicot View MSA
122049779 5273 Angiosperm View MSA
121351769 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain