Gene : Tp57577_TGAC_v2_gene34251 T. pratense v2
Defline:  (1 of 2) PTHR11685:SF135 - E3 UBIQUITIN-PROTEIN LIGASE ARI10-RELATED Genomic Order:  1891
Name:  ? Tp57577_TGAC_v2_gene34251 Secondary Identifier:  ? PAC:35988637
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene34251 0.5kb upstream 0.5kb upstream 8357 true Tp57577_TGAC_v2_LG3: 15245174-15253530 Trifolium pratense
Tp57577_TGAC_v2_gene34251 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 15253031-15253530 Trifolium pratense
Tp57577_TGAC_v2_gene34251 0.5kb downstream 0.5kb downstream 8357 true Tp57577_TGAC_v2_LG3: 15244674-15253030 Trifolium pratense
Tp57577_TGAC_v2_gene34251 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 15244674-15245173 Trifolium pratense
Tp57577_TGAC_v2_gene34251 1.0kb upstream 1.0kb upstream 8857 true Tp57577_TGAC_v2_LG3: 15245174-15254030 Trifolium pratense
Tp57577_TGAC_v2_gene34251 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 15253031-15254030 Trifolium pratense
Tp57577_TGAC_v2_gene34251 1.0kb downstream 1.0kb downstream 8857 true Tp57577_TGAC_v2_LG3: 15244174-15253030 Trifolium pratense
Tp57577_TGAC_v2_gene34251 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 15244174-15245173 Trifolium pratense
Tp57577_TGAC_v2_gene34251 2.0kb upstream 2.0kb upstream 9857 true Tp57577_TGAC_v2_LG3: 15245174-15255030 Trifolium pratense
Tp57577_TGAC_v2_gene34251 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 15253031-15255030 Trifolium pratense
Tp57577_TGAC_v2_gene34251 2.0kb downstream 2.0kb downstream 9857 true Tp57577_TGAC_v2_LG3: 15243174-15253030 Trifolium pratense
Tp57577_TGAC_v2_gene34251 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 15243174-15245173 Trifolium pratense
Tp57577_TGAC_v2_gene34251 5.0kb upstream 5.0kb upstream 12857 true Tp57577_TGAC_v2_LG3: 15245174-15258030 Trifolium pratense
Tp57577_TGAC_v2_gene34251 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 15253031-15258030 Trifolium pratense
Tp57577_TGAC_v2_gene34251 5.0kb downstream 5.0kb downstream 12857 true Tp57577_TGAC_v2_LG3: 15240174-15253030 Trifolium pratense
Tp57577_TGAC_v2_gene34251 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 15240174-15245173 Trifolium pratense
Tp57577_TGAC_v2_gene34251 10.0kb upstream 10.0kb upstream 17857 true Tp57577_TGAC_v2_LG3: 15245174-15263030 Trifolium pratense
Tp57577_TGAC_v2_gene34251 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 15253031-15263030 Trifolium pratense
Tp57577_TGAC_v2_gene34251 10.0kb downstream 10.0kb downstream 17857 true Tp57577_TGAC_v2_LG3: 15235174-15253030 Trifolium pratense
Tp57577_TGAC_v2_gene34251 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 15235174-15245173 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314915 5265 Fabidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain