Gene : Tp57577_TGAC_v2_gene2861 T. pratense v2
Defline:  (1 of 4) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide) Genomic Order:  1707
Name:  ? Tp57577_TGAC_v2_gene2861 Secondary Identifier:  ? PAC:35990005
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2861 0.5kb upstream 0.5kb upstream 3821 true Tp57577_TGAC_v2_LG3: 13708304-13712124 Trifolium pratense
Tp57577_TGAC_v2_gene2861 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 13711625-13712124 Trifolium pratense
Tp57577_TGAC_v2_gene2861 0.5kb downstream 0.5kb downstream 3821 true Tp57577_TGAC_v2_LG3: 13707804-13711624 Trifolium pratense
Tp57577_TGAC_v2_gene2861 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 13707804-13708303 Trifolium pratense
Tp57577_TGAC_v2_gene2861 1.0kb upstream 1.0kb upstream 4321 true Tp57577_TGAC_v2_LG3: 13708304-13712624 Trifolium pratense
Tp57577_TGAC_v2_gene2861 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 13711625-13712624 Trifolium pratense
Tp57577_TGAC_v2_gene2861 1.0kb downstream 1.0kb downstream 4321 true Tp57577_TGAC_v2_LG3: 13707304-13711624 Trifolium pratense
Tp57577_TGAC_v2_gene2861 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 13707304-13708303 Trifolium pratense
Tp57577_TGAC_v2_gene2861 2.0kb upstream 2.0kb upstream 5321 true Tp57577_TGAC_v2_LG3: 13708304-13713624 Trifolium pratense
Tp57577_TGAC_v2_gene2861 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 13711625-13713624 Trifolium pratense
Tp57577_TGAC_v2_gene2861 2.0kb downstream 2.0kb downstream 5321 true Tp57577_TGAC_v2_LG3: 13706304-13711624 Trifolium pratense
Tp57577_TGAC_v2_gene2861 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 13706304-13708303 Trifolium pratense
Tp57577_TGAC_v2_gene2861 5.0kb upstream 5.0kb upstream 8321 true Tp57577_TGAC_v2_LG3: 13708304-13716624 Trifolium pratense
Tp57577_TGAC_v2_gene2861 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 13711625-13716624 Trifolium pratense
Tp57577_TGAC_v2_gene2861 5.0kb downstream 5.0kb downstream 8321 true Tp57577_TGAC_v2_LG3: 13703304-13711624 Trifolium pratense
Tp57577_TGAC_v2_gene2861 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 13703304-13708303 Trifolium pratense
Tp57577_TGAC_v2_gene2861 10.0kb upstream 10.0kb upstream 13321 true Tp57577_TGAC_v2_LG3: 13708304-13721624 Trifolium pratense
Tp57577_TGAC_v2_gene2861 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 13711625-13721624 Trifolium pratense
Tp57577_TGAC_v2_gene2861 10.0kb downstream 10.0kb downstream 13321 true Tp57577_TGAC_v2_LG3: 13698304-13711624 Trifolium pratense
Tp57577_TGAC_v2_gene2861 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 13698304-13708303 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305033 5265 Fabidae View MSA
124068801 5270 Rosid View MSA
123737641 5271 Pentapetalae View MSA
122793224 5272 Eudicot View MSA
122045781 5273 Angiosperm View MSA
121346461 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain