Gene : Tp57577_TGAC_v2_gene27750 T. pratense v2
Defline:  (1 of 1) 1.14.19.6 - Delta(12)-fatty-acid desaturase / Oleoyl-CoA Delta(12) desaturase Genomic Order:  3158
Name:  ? Tp57577_TGAC_v2_gene27750 Secondary Identifier:  ? PAC:35980487
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5995 Trifolium pratense pathologic  
Tpratense PWY-762 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene27750 0.5kb upstream 0.5kb upstream 4098 true Tp57577_TGAC_v2_LG1: 27237773-27241870 Trifolium pratense
Tp57577_TGAC_v2_gene27750 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 27237773-27238272 Trifolium pratense
Tp57577_TGAC_v2_gene27750 0.5kb downstream 0.5kb downstream 4098 true Tp57577_TGAC_v2_LG1: 27238273-27242370 Trifolium pratense
Tp57577_TGAC_v2_gene27750 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 27241871-27242370 Trifolium pratense
Tp57577_TGAC_v2_gene27750 1.0kb upstream 1.0kb upstream 4598 true Tp57577_TGAC_v2_LG1: 27237273-27241870 Trifolium pratense
Tp57577_TGAC_v2_gene27750 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 27237273-27238272 Trifolium pratense
Tp57577_TGAC_v2_gene27750 1.0kb downstream 1.0kb downstream 4598 true Tp57577_TGAC_v2_LG1: 27238273-27242870 Trifolium pratense
Tp57577_TGAC_v2_gene27750 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 27241871-27242870 Trifolium pratense
Tp57577_TGAC_v2_gene27750 2.0kb upstream 2.0kb upstream 5598 true Tp57577_TGAC_v2_LG1: 27236273-27241870 Trifolium pratense
Tp57577_TGAC_v2_gene27750 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 27236273-27238272 Trifolium pratense
Tp57577_TGAC_v2_gene27750 2.0kb downstream 2.0kb downstream 5598 true Tp57577_TGAC_v2_LG1: 27238273-27243870 Trifolium pratense
Tp57577_TGAC_v2_gene27750 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 27241871-27243870 Trifolium pratense
Tp57577_TGAC_v2_gene27750 5.0kb upstream 5.0kb upstream 8598 true Tp57577_TGAC_v2_LG1: 27233273-27241870 Trifolium pratense
Tp57577_TGAC_v2_gene27750 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 27233273-27238272 Trifolium pratense
Tp57577_TGAC_v2_gene27750 5.0kb downstream 5.0kb downstream 8598 true Tp57577_TGAC_v2_LG1: 27238273-27246870 Trifolium pratense
Tp57577_TGAC_v2_gene27750 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 27241871-27246870 Trifolium pratense
Tp57577_TGAC_v2_gene27750 10.0kb upstream 10.0kb upstream 13598 true Tp57577_TGAC_v2_LG1: 27228273-27241870 Trifolium pratense
Tp57577_TGAC_v2_gene27750 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 27228273-27238272 Trifolium pratense
Tp57577_TGAC_v2_gene27750 10.0kb downstream 10.0kb downstream 13598 true Tp57577_TGAC_v2_LG1: 27238273-27251870 Trifolium pratense
Tp57577_TGAC_v2_gene27750 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 27241871-27251870 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041215 5273 Angiosperm View MSA
122294925 5265 Fabidae View MSA
124074119 5270 Rosid View MSA
123747966 5271 Pentapetalae View MSA
122789327 5272 Eudicot View MSA
121347269 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain