Gene : Tp57577_TGAC_v2_gene29781 T. pratense v2
Defline:  (1 of 4) PTHR24286:SF86 - ABSCISIC ACID 8'-HYDROXYLASE 2 Genomic Order:  1554
Name:  ? Tp57577_TGAC_v2_gene29781 Secondary Identifier:  ? PAC:35980553
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5271 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene29781 0.5kb upstream 0.5kb upstream 10079 true Tp57577_TGAC_v2_LG1: 12900951-12911029 Trifolium pratense
Tp57577_TGAC_v2_gene29781 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 12910530-12911029 Trifolium pratense
Tp57577_TGAC_v2_gene29781 0.5kb downstream 0.5kb downstream 10079 true Tp57577_TGAC_v2_LG1: 12900451-12910529 Trifolium pratense
Tp57577_TGAC_v2_gene29781 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 12900451-12900950 Trifolium pratense
Tp57577_TGAC_v2_gene29781 1.0kb upstream 1.0kb upstream 10579 true Tp57577_TGAC_v2_LG1: 12900951-12911529 Trifolium pratense
Tp57577_TGAC_v2_gene29781 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 12910530-12911529 Trifolium pratense
Tp57577_TGAC_v2_gene29781 1.0kb downstream 1.0kb downstream 10579 true Tp57577_TGAC_v2_LG1: 12899951-12910529 Trifolium pratense
Tp57577_TGAC_v2_gene29781 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 12899951-12900950 Trifolium pratense
Tp57577_TGAC_v2_gene29781 2.0kb upstream 2.0kb upstream 11579 true Tp57577_TGAC_v2_LG1: 12900951-12912529 Trifolium pratense
Tp57577_TGAC_v2_gene29781 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 12910530-12912529 Trifolium pratense
Tp57577_TGAC_v2_gene29781 2.0kb downstream 2.0kb downstream 11579 true Tp57577_TGAC_v2_LG1: 12898951-12910529 Trifolium pratense
Tp57577_TGAC_v2_gene29781 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 12898951-12900950 Trifolium pratense
Tp57577_TGAC_v2_gene29781 5.0kb upstream 5.0kb upstream 14579 true Tp57577_TGAC_v2_LG1: 12900951-12915529 Trifolium pratense
Tp57577_TGAC_v2_gene29781 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 12910530-12915529 Trifolium pratense
Tp57577_TGAC_v2_gene29781 5.0kb downstream 5.0kb downstream 14579 true Tp57577_TGAC_v2_LG1: 12895951-12910529 Trifolium pratense
Tp57577_TGAC_v2_gene29781 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 12895951-12900950 Trifolium pratense
Tp57577_TGAC_v2_gene29781 10.0kb upstream 10.0kb upstream 19579 true Tp57577_TGAC_v2_LG1: 12900951-12920529 Trifolium pratense
Tp57577_TGAC_v2_gene29781 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 12910530-12920529 Trifolium pratense
Tp57577_TGAC_v2_gene29781 10.0kb downstream 10.0kb downstream 19579 true Tp57577_TGAC_v2_LG1: 12890951-12910529 Trifolium pratense
Tp57577_TGAC_v2_gene29781 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 12890951-12900950 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304144 5265 Fabidae View MSA
124067645 5270 Rosid View MSA
123747407 5271 Pentapetalae View MSA
122789954 5272 Eudicot View MSA
122044932 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121350004 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain