Gene : Tp57577_TGAC_v2_gene28852 T. pratense v2
Defline:  (1 of 2) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  1095
Name:  ? Tp57577_TGAC_v2_gene28852 Secondary Identifier:  ? PAC:35979261
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-4942 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28852 0.5kb upstream 0.5kb upstream 9365 true Tp57577_TGAC_v2_LG1: 8864159-8873523 Trifolium pratense
Tp57577_TGAC_v2_gene28852 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 8864159-8864658 Trifolium pratense
Tp57577_TGAC_v2_gene28852 0.5kb downstream 0.5kb downstream 9365 true Tp57577_TGAC_v2_LG1: 8864659-8874023 Trifolium pratense
Tp57577_TGAC_v2_gene28852 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 8873524-8874023 Trifolium pratense
Tp57577_TGAC_v2_gene28852 1.0kb upstream 1.0kb upstream 9865 true Tp57577_TGAC_v2_LG1: 8863659-8873523 Trifolium pratense
Tp57577_TGAC_v2_gene28852 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 8863659-8864658 Trifolium pratense
Tp57577_TGAC_v2_gene28852 1.0kb downstream 1.0kb downstream 9865 true Tp57577_TGAC_v2_LG1: 8864659-8874523 Trifolium pratense
Tp57577_TGAC_v2_gene28852 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 8873524-8874523 Trifolium pratense
Tp57577_TGAC_v2_gene28852 2.0kb upstream 2.0kb upstream 10865 true Tp57577_TGAC_v2_LG1: 8862659-8873523 Trifolium pratense
Tp57577_TGAC_v2_gene28852 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 8862659-8864658 Trifolium pratense
Tp57577_TGAC_v2_gene28852 2.0kb downstream 2.0kb downstream 10865 true Tp57577_TGAC_v2_LG1: 8864659-8875523 Trifolium pratense
Tp57577_TGAC_v2_gene28852 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 8873524-8875523 Trifolium pratense
Tp57577_TGAC_v2_gene28852 5.0kb upstream 5.0kb upstream 13865 true Tp57577_TGAC_v2_LG1: 8859659-8873523 Trifolium pratense
Tp57577_TGAC_v2_gene28852 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 8859659-8864658 Trifolium pratense
Tp57577_TGAC_v2_gene28852 5.0kb downstream 5.0kb downstream 13865 true Tp57577_TGAC_v2_LG1: 8864659-8878523 Trifolium pratense
Tp57577_TGAC_v2_gene28852 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 8873524-8878523 Trifolium pratense
Tp57577_TGAC_v2_gene28852 10.0kb upstream 10.0kb upstream 18865 true Tp57577_TGAC_v2_LG1: 8854659-8873523 Trifolium pratense
Tp57577_TGAC_v2_gene28852 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 8854659-8864658 Trifolium pratense
Tp57577_TGAC_v2_gene28852 10.0kb downstream 10.0kb downstream 18865 true Tp57577_TGAC_v2_LG1: 8864659-8883523 Trifolium pratense
Tp57577_TGAC_v2_gene28852 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 8873524-8883523 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303935 5265 Fabidae View MSA
124060864 5270 Rosid View MSA
123737400 5271 Pentapetalae View MSA
122792723 5272 Eudicot View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain