Gene : Tp57577_TGAC_v2_gene6799 T. pratense v2
Defline:  (1 of 8) KOG0446 - Vacuolar sorting protein VPS1, dynamin, and related proteins Genomic Order:  1044
Name:  ? Tp57577_TGAC_v2_gene6799 Secondary Identifier:  ? PAC:35989453
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6799 0.5kb upstream 0.5kb upstream 2705 true Tp57577_TGAC_v2_LG3: 7870433-7873137 Trifolium pratense
Tp57577_TGAC_v2_gene6799 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 7872638-7873137 Trifolium pratense
Tp57577_TGAC_v2_gene6799 0.5kb downstream 0.5kb downstream 2705 true Tp57577_TGAC_v2_LG3: 7869933-7872637 Trifolium pratense
Tp57577_TGAC_v2_gene6799 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 7869933-7870432 Trifolium pratense
Tp57577_TGAC_v2_gene6799 1.0kb upstream 1.0kb upstream 3205 true Tp57577_TGAC_v2_LG3: 7870433-7873637 Trifolium pratense
Tp57577_TGAC_v2_gene6799 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 7872638-7873637 Trifolium pratense
Tp57577_TGAC_v2_gene6799 1.0kb downstream 1.0kb downstream 3205 true Tp57577_TGAC_v2_LG3: 7869433-7872637 Trifolium pratense
Tp57577_TGAC_v2_gene6799 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 7869433-7870432 Trifolium pratense
Tp57577_TGAC_v2_gene6799 2.0kb upstream 2.0kb upstream 4205 true Tp57577_TGAC_v2_LG3: 7870433-7874637 Trifolium pratense
Tp57577_TGAC_v2_gene6799 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 7872638-7874637 Trifolium pratense
Tp57577_TGAC_v2_gene6799 2.0kb downstream 2.0kb downstream 4205 true Tp57577_TGAC_v2_LG3: 7868433-7872637 Trifolium pratense
Tp57577_TGAC_v2_gene6799 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 7868433-7870432 Trifolium pratense
Tp57577_TGAC_v2_gene6799 5.0kb upstream 5.0kb upstream 7205 true Tp57577_TGAC_v2_LG3: 7870433-7877637 Trifolium pratense
Tp57577_TGAC_v2_gene6799 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 7872638-7877637 Trifolium pratense
Tp57577_TGAC_v2_gene6799 5.0kb downstream 5.0kb downstream 7205 true Tp57577_TGAC_v2_LG3: 7865433-7872637 Trifolium pratense
Tp57577_TGAC_v2_gene6799 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 7865433-7870432 Trifolium pratense
Tp57577_TGAC_v2_gene6799 10.0kb upstream 10.0kb upstream 12205 true Tp57577_TGAC_v2_LG3: 7870433-7882637 Trifolium pratense
Tp57577_TGAC_v2_gene6799 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 7872638-7882637 Trifolium pratense
Tp57577_TGAC_v2_gene6799 10.0kb downstream 10.0kb downstream 12205 true Tp57577_TGAC_v2_LG3: 7860433-7872637 Trifolium pratense
Tp57577_TGAC_v2_gene6799 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 7860433-7870432 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028487 5273 Angiosperm View MSA
122313012 5265 Fabidae View MSA
124050430 5270 Rosid View MSA
123744876 5271 Pentapetalae View MSA
122787544 5272 Eudicot View MSA
121349568 5274 Embryophyte View MSA
123426795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain