Gene : Tp57577_TGAC_v2_gene8809 T. pratense v2

Defline:  (1 of 1) PTHR10994:SF67 - RETICULON-LIKE PROTEIN B16 Genomic Order:  177
Name:  ? Tp57577_TGAC_v2_gene8809 Secondary Identifier:  ? PAC:35989153

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8809 0.5kb upstream 0.5kb upstream 4727 true Tp57577_TGAC_v2_LG3: 1475606-1480332 Trifolium pratense
Tp57577_TGAC_v2_gene8809 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 1479833-1480332 Trifolium pratense
Tp57577_TGAC_v2_gene8809 0.5kb downstream 0.5kb downstream 4727 true Tp57577_TGAC_v2_LG3: 1475106-1479832 Trifolium pratense
Tp57577_TGAC_v2_gene8809 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 1475106-1475605 Trifolium pratense
Tp57577_TGAC_v2_gene8809 1.0kb upstream 1.0kb upstream 5227 true Tp57577_TGAC_v2_LG3: 1475606-1480832 Trifolium pratense
Tp57577_TGAC_v2_gene8809 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 1479833-1480832 Trifolium pratense
Tp57577_TGAC_v2_gene8809 1.0kb downstream 1.0kb downstream 5227 true Tp57577_TGAC_v2_LG3: 1474606-1479832 Trifolium pratense
Tp57577_TGAC_v2_gene8809 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 1474606-1475605 Trifolium pratense
Tp57577_TGAC_v2_gene8809 2.0kb upstream 2.0kb upstream 6227 true Tp57577_TGAC_v2_LG3: 1475606-1481832 Trifolium pratense
Tp57577_TGAC_v2_gene8809 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 1479833-1481832 Trifolium pratense
Tp57577_TGAC_v2_gene8809 2.0kb downstream 2.0kb downstream 6227 true Tp57577_TGAC_v2_LG3: 1473606-1479832 Trifolium pratense
Tp57577_TGAC_v2_gene8809 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 1473606-1475605 Trifolium pratense
Tp57577_TGAC_v2_gene8809 5.0kb upstream 5.0kb upstream 9227 true Tp57577_TGAC_v2_LG3: 1475606-1484832 Trifolium pratense
Tp57577_TGAC_v2_gene8809 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 1479833-1484832 Trifolium pratense
Tp57577_TGAC_v2_gene8809 5.0kb downstream 5.0kb downstream 9227 true Tp57577_TGAC_v2_LG3: 1470606-1479832 Trifolium pratense
Tp57577_TGAC_v2_gene8809 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 1470606-1475605 Trifolium pratense
Tp57577_TGAC_v2_gene8809 10.0kb upstream 10.0kb upstream 14227 true Tp57577_TGAC_v2_LG3: 1475606-1489832 Trifolium pratense
Tp57577_TGAC_v2_gene8809 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 1479833-1489832 Trifolium pratense
Tp57577_TGAC_v2_gene8809 10.0kb downstream 10.0kb downstream 14227 true Tp57577_TGAC_v2_LG3: 1465606-1479832 Trifolium pratense
Tp57577_TGAC_v2_gene8809 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 1465606-1475605 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310328 5265 Fabidae View MSA
124050388 5270 Rosid View MSA
123750522 5271 Pentapetalae View MSA
122793099 5272 Eudicot View MSA
122047418 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain