Gene : Tp57577_TGAC_v2_gene5103 T. pratense v2

Defline:  (1 of 7) KOG2615 - Permease of the major facilitator superfamily Genomic Order:  2884
Name:  ? Tp57577_TGAC_v2_gene5103 Secondary Identifier:  ? PAC:35987196

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5103 0.5kb upstream 0.5kb upstream 6409 true Tp57577_TGAC_v2_LG3: 24348314-24354722 Trifolium pratense
Tp57577_TGAC_v2_gene5103 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 24354223-24354722 Trifolium pratense
Tp57577_TGAC_v2_gene5103 0.5kb downstream 0.5kb downstream 6409 true Tp57577_TGAC_v2_LG3: 24347814-24354222 Trifolium pratense
Tp57577_TGAC_v2_gene5103 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 24347814-24348313 Trifolium pratense
Tp57577_TGAC_v2_gene5103 1.0kb upstream 1.0kb upstream 6909 true Tp57577_TGAC_v2_LG3: 24348314-24355222 Trifolium pratense
Tp57577_TGAC_v2_gene5103 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 24354223-24355222 Trifolium pratense
Tp57577_TGAC_v2_gene5103 1.0kb downstream 1.0kb downstream 6909 true Tp57577_TGAC_v2_LG3: 24347314-24354222 Trifolium pratense
Tp57577_TGAC_v2_gene5103 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 24347314-24348313 Trifolium pratense
Tp57577_TGAC_v2_gene5103 2.0kb upstream 2.0kb upstream 7909 true Tp57577_TGAC_v2_LG3: 24348314-24356222 Trifolium pratense
Tp57577_TGAC_v2_gene5103 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 24354223-24356222 Trifolium pratense
Tp57577_TGAC_v2_gene5103 2.0kb downstream 2.0kb downstream 7909 true Tp57577_TGAC_v2_LG3: 24346314-24354222 Trifolium pratense
Tp57577_TGAC_v2_gene5103 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 24346314-24348313 Trifolium pratense
Tp57577_TGAC_v2_gene5103 5.0kb upstream 5.0kb upstream 10909 true Tp57577_TGAC_v2_LG3: 24348314-24359222 Trifolium pratense
Tp57577_TGAC_v2_gene5103 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 24354223-24359222 Trifolium pratense
Tp57577_TGAC_v2_gene5103 5.0kb downstream 5.0kb downstream 10909 true Tp57577_TGAC_v2_LG3: 24343314-24354222 Trifolium pratense
Tp57577_TGAC_v2_gene5103 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 24343314-24348313 Trifolium pratense
Tp57577_TGAC_v2_gene5103 10.0kb upstream 10.0kb upstream 15909 true Tp57577_TGAC_v2_LG3: 24348314-24364222 Trifolium pratense
Tp57577_TGAC_v2_gene5103 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 24354223-24364222 Trifolium pratense
Tp57577_TGAC_v2_gene5103 10.0kb downstream 10.0kb downstream 15909 true Tp57577_TGAC_v2_LG3: 24338314-24354222 Trifolium pratense
Tp57577_TGAC_v2_gene5103 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 24338314-24348313 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122287644 5265 Fabidae View MSA
124072003 5270 Rosid View MSA
123752940 5271 Pentapetalae View MSA
122794980 5272 Eudicot View MSA
122050303 5273 Angiosperm View MSA
121351642 5274 Embryophyte View MSA
123428346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain