Gene : Tp57577_TGAC_v2_gene6289 T. pratense v2
Defline:  (1 of 5) PTHR11452:SF14 - ALPHA-GALACTOSIDASE A Genomic Order:  733
Name:  ? Tp57577_TGAC_v2_gene6289 Secondary Identifier:  ? PAC:35987380
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY0-1301 Trifolium pratense pathologic  
Tpratense PWY-6527 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6289 0.5kb upstream 0.5kb upstream 2754 true Tp57577_TGAC_v2_LG3: 5491326-5494079 Trifolium pratense
Tp57577_TGAC_v2_gene6289 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 5491326-5491825 Trifolium pratense
Tp57577_TGAC_v2_gene6289 0.5kb downstream 0.5kb downstream 2754 true Tp57577_TGAC_v2_LG3: 5491826-5494579 Trifolium pratense
Tp57577_TGAC_v2_gene6289 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 5494080-5494579 Trifolium pratense
Tp57577_TGAC_v2_gene6289 1.0kb upstream 1.0kb upstream 3254 true Tp57577_TGAC_v2_LG3: 5490826-5494079 Trifolium pratense
Tp57577_TGAC_v2_gene6289 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 5490826-5491825 Trifolium pratense
Tp57577_TGAC_v2_gene6289 1.0kb downstream 1.0kb downstream 3254 true Tp57577_TGAC_v2_LG3: 5491826-5495079 Trifolium pratense
Tp57577_TGAC_v2_gene6289 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 5494080-5495079 Trifolium pratense
Tp57577_TGAC_v2_gene6289 2.0kb upstream 2.0kb upstream 4254 true Tp57577_TGAC_v2_LG3: 5489826-5494079 Trifolium pratense
Tp57577_TGAC_v2_gene6289 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 5489826-5491825 Trifolium pratense
Tp57577_TGAC_v2_gene6289 2.0kb downstream 2.0kb downstream 4254 true Tp57577_TGAC_v2_LG3: 5491826-5496079 Trifolium pratense
Tp57577_TGAC_v2_gene6289 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 5494080-5496079 Trifolium pratense
Tp57577_TGAC_v2_gene6289 5.0kb upstream 5.0kb upstream 7254 true Tp57577_TGAC_v2_LG3: 5486826-5494079 Trifolium pratense
Tp57577_TGAC_v2_gene6289 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 5486826-5491825 Trifolium pratense
Tp57577_TGAC_v2_gene6289 5.0kb downstream 5.0kb downstream 7254 true Tp57577_TGAC_v2_LG3: 5491826-5499079 Trifolium pratense
Tp57577_TGAC_v2_gene6289 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 5494080-5499079 Trifolium pratense
Tp57577_TGAC_v2_gene6289 10.0kb upstream 10.0kb upstream 12254 true Tp57577_TGAC_v2_LG3: 5481826-5494079 Trifolium pratense
Tp57577_TGAC_v2_gene6289 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 5481826-5491825 Trifolium pratense
Tp57577_TGAC_v2_gene6289 10.0kb downstream 10.0kb downstream 12254 true Tp57577_TGAC_v2_LG3: 5491826-5504079 Trifolium pratense
Tp57577_TGAC_v2_gene6289 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 5494080-5504079 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316701 5265 Fabidae View MSA
124041499 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain