Gene : Tp57577_TGAC_v2_gene3181 T. pratense v2
Defline:  (1 of 2) 1.1.1.35//4.2.1.17//4.2.1.55//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // 3-hydroxybutyryl-CoA dehydratase / Crotonase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase Genomic Order:  2912
Name:  ? Tp57577_TGAC_v2_gene3181 Secondary Identifier:  ? PAC:35980390
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ILEUDEG-PWY Trifolium pratense pathologic  
Tpratense PWY-5136 Trifolium pratense pathologic  
Tpratense PWY-5137 Trifolium pratense pathologic  
Tpratense PWY-5138 Trifolium pratense pathologic  
Tpratense PWY-561 Trifolium pratense pathologic  
Tpratense PWY-6435 Trifolium pratense pathologic  
Tpratense PWY-6837 Trifolium pratense pathologic  
Tpratense PWY-7036 Trifolium pratense pathologic  
Tpratense PWY-735 Trifolium pratense pathologic  
Tpratense PWY-7606 Trifolium pratense pathologic  
Tpratense VALDEG-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3181 0.5kb upstream 0.5kb upstream 9079 true Tp57577_TGAC_v2_LG1: 24476917-24485995 Trifolium pratense
Tp57577_TGAC_v2_gene3181 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 24476917-24477416 Trifolium pratense
Tp57577_TGAC_v2_gene3181 0.5kb downstream 0.5kb downstream 9079 true Tp57577_TGAC_v2_LG1: 24477417-24486495 Trifolium pratense
Tp57577_TGAC_v2_gene3181 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 24485996-24486495 Trifolium pratense
Tp57577_TGAC_v2_gene3181 1.0kb upstream 1.0kb upstream 9579 true Tp57577_TGAC_v2_LG1: 24476417-24485995 Trifolium pratense
Tp57577_TGAC_v2_gene3181 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 24476417-24477416 Trifolium pratense
Tp57577_TGAC_v2_gene3181 1.0kb downstream 1.0kb downstream 9579 true Tp57577_TGAC_v2_LG1: 24477417-24486995 Trifolium pratense
Tp57577_TGAC_v2_gene3181 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 24485996-24486995 Trifolium pratense
Tp57577_TGAC_v2_gene3181 2.0kb upstream 2.0kb upstream 10579 true Tp57577_TGAC_v2_LG1: 24475417-24485995 Trifolium pratense
Tp57577_TGAC_v2_gene3181 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 24475417-24477416 Trifolium pratense
Tp57577_TGAC_v2_gene3181 2.0kb downstream 2.0kb downstream 10579 true Tp57577_TGAC_v2_LG1: 24477417-24487995 Trifolium pratense
Tp57577_TGAC_v2_gene3181 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 24485996-24487995 Trifolium pratense
Tp57577_TGAC_v2_gene3181 5.0kb upstream 5.0kb upstream 13579 true Tp57577_TGAC_v2_LG1: 24472417-24485995 Trifolium pratense
Tp57577_TGAC_v2_gene3181 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 24472417-24477416 Trifolium pratense
Tp57577_TGAC_v2_gene3181 5.0kb downstream 5.0kb downstream 13579 true Tp57577_TGAC_v2_LG1: 24477417-24490995 Trifolium pratense
Tp57577_TGAC_v2_gene3181 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 24485996-24490995 Trifolium pratense
Tp57577_TGAC_v2_gene3181 10.0kb upstream 10.0kb upstream 18579 true Tp57577_TGAC_v2_LG1: 24467417-24485995 Trifolium pratense
Tp57577_TGAC_v2_gene3181 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 24467417-24477416 Trifolium pratense
Tp57577_TGAC_v2_gene3181 10.0kb downstream 10.0kb downstream 18579 true Tp57577_TGAC_v2_LG1: 24477417-24495995 Trifolium pratense
Tp57577_TGAC_v2_gene3181 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 24485996-24495995 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301704 5265 Fabidae View MSA
124061936 5270 Rosid View MSA
123740661 5271 Pentapetalae View MSA
122785876 5272 Eudicot View MSA
122047259 5273 Angiosperm View MSA
121345387 5274 Embryophyte View MSA
123424743 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain