Gene : Tp57577_TGAC_v2_gene30548 T. pratense v2
Defline:  (1 of 1) PTHR10994:SF77 - RETICULON-LIKE PROTEIN B10-RELATED Genomic Order:  522
Name:  ? Tp57577_TGAC_v2_gene30548 Secondary Identifier:  ? PAC:35978159
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30548 0.5kb upstream 0.5kb upstream 3328 true Tp57577_TGAC_v2_LG1: 3963627-3966954 Trifolium pratense
Tp57577_TGAC_v2_gene30548 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 3963627-3964126 Trifolium pratense
Tp57577_TGAC_v2_gene30548 0.5kb downstream 0.5kb downstream 3328 true Tp57577_TGAC_v2_LG1: 3964127-3967454 Trifolium pratense
Tp57577_TGAC_v2_gene30548 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 3966955-3967454 Trifolium pratense
Tp57577_TGAC_v2_gene30548 1.0kb upstream 1.0kb upstream 3828 true Tp57577_TGAC_v2_LG1: 3963127-3966954 Trifolium pratense
Tp57577_TGAC_v2_gene30548 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 3963127-3964126 Trifolium pratense
Tp57577_TGAC_v2_gene30548 1.0kb downstream 1.0kb downstream 3828 true Tp57577_TGAC_v2_LG1: 3964127-3967954 Trifolium pratense
Tp57577_TGAC_v2_gene30548 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 3966955-3967954 Trifolium pratense
Tp57577_TGAC_v2_gene30548 2.0kb upstream 2.0kb upstream 4828 true Tp57577_TGAC_v2_LG1: 3962127-3966954 Trifolium pratense
Tp57577_TGAC_v2_gene30548 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 3962127-3964126 Trifolium pratense
Tp57577_TGAC_v2_gene30548 2.0kb downstream 2.0kb downstream 4828 true Tp57577_TGAC_v2_LG1: 3964127-3968954 Trifolium pratense
Tp57577_TGAC_v2_gene30548 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 3966955-3968954 Trifolium pratense
Tp57577_TGAC_v2_gene30548 5.0kb upstream 5.0kb upstream 7828 true Tp57577_TGAC_v2_LG1: 3959127-3966954 Trifolium pratense
Tp57577_TGAC_v2_gene30548 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 3959127-3964126 Trifolium pratense
Tp57577_TGAC_v2_gene30548 5.0kb downstream 5.0kb downstream 7828 true Tp57577_TGAC_v2_LG1: 3964127-3971954 Trifolium pratense
Tp57577_TGAC_v2_gene30548 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 3966955-3971954 Trifolium pratense
Tp57577_TGAC_v2_gene30548 10.0kb upstream 10.0kb upstream 12828 true Tp57577_TGAC_v2_LG1: 3954127-3966954 Trifolium pratense
Tp57577_TGAC_v2_gene30548 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 3954127-3964126 Trifolium pratense
Tp57577_TGAC_v2_gene30548 10.0kb downstream 10.0kb downstream 12828 true Tp57577_TGAC_v2_LG1: 3964127-3976954 Trifolium pratense
Tp57577_TGAC_v2_gene30548 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 3966955-3976954 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301414 5265 Fabidae View MSA
124060883 5270 Rosid View MSA
123752394 5271 Pentapetalae View MSA
122786590 5272 Eudicot View MSA
122047418 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain