Gene : Tp57577_TGAC_v2_gene8416 T. pratense v2
Defline:  (1 of 1) PTHR10909:SF331 - ACYL-COENZYME A OXIDASE 4, PEROXISOMAL Genomic Order:  16
Name:  ? Tp57577_TGAC_v2_gene8416 Secondary Identifier:  ? PAC:35982237
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5136 Trifolium pratense pathologic  
Tpratense PWY-561 Trifolium pratense pathologic  
Tpratense PWY-6837 Trifolium pratense pathologic  
Tpratense PWY-735 Trifolium pratense pathologic  
Tpratense PWY-7606 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8416 0.5kb upstream 0.5kb upstream 6513 true Tp57577_TGAC_v2_scaf_275: 198885-205397 Trifolium pratense
Tp57577_TGAC_v2_gene8416 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_275: 198885-199384 Trifolium pratense
Tp57577_TGAC_v2_gene8416 0.5kb downstream 0.5kb downstream 6513 true Tp57577_TGAC_v2_scaf_275: 199385-205897 Trifolium pratense
Tp57577_TGAC_v2_gene8416 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_275: 205398-205897 Trifolium pratense
Tp57577_TGAC_v2_gene8416 1.0kb upstream 1.0kb upstream 7013 true Tp57577_TGAC_v2_scaf_275: 198385-205397 Trifolium pratense
Tp57577_TGAC_v2_gene8416 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_275: 198385-199384 Trifolium pratense
Tp57577_TGAC_v2_gene8416 1.0kb downstream 1.0kb downstream 7013 true Tp57577_TGAC_v2_scaf_275: 199385-206397 Trifolium pratense
Tp57577_TGAC_v2_gene8416 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_275: 205398-206397 Trifolium pratense
Tp57577_TGAC_v2_gene8416 2.0kb upstream 2.0kb upstream 8013 true Tp57577_TGAC_v2_scaf_275: 197385-205397 Trifolium pratense
Tp57577_TGAC_v2_gene8416 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_275: 197385-199384 Trifolium pratense
Tp57577_TGAC_v2_gene8416 2.0kb downstream 2.0kb downstream 8013 true Tp57577_TGAC_v2_scaf_275: 199385-207397 Trifolium pratense
Tp57577_TGAC_v2_gene8416 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_275: 205398-207397 Trifolium pratense
Tp57577_TGAC_v2_gene8416 5.0kb upstream 5.0kb upstream 11013 true Tp57577_TGAC_v2_scaf_275: 194385-205397 Trifolium pratense
Tp57577_TGAC_v2_gene8416 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_275: 194385-199384 Trifolium pratense
Tp57577_TGAC_v2_gene8416 5.0kb downstream 5.0kb downstream 11013 true Tp57577_TGAC_v2_scaf_275: 199385-210397 Trifolium pratense
Tp57577_TGAC_v2_gene8416 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_275: 205398-210397 Trifolium pratense
Tp57577_TGAC_v2_gene8416 10.0kb upstream 10.0kb upstream 16013 true Tp57577_TGAC_v2_scaf_275: 189385-205397 Trifolium pratense
Tp57577_TGAC_v2_gene8416 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_275: 189385-199384 Trifolium pratense
Tp57577_TGAC_v2_gene8416 10.0kb downstream 10.0kb downstream 16013 true Tp57577_TGAC_v2_scaf_275: 199385-215397 Trifolium pratense
Tp57577_TGAC_v2_gene8416 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_275: 205398-215397 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309589 5265 Fabidae View MSA
124065996 5270 Rosid View MSA
123739939 5271 Pentapetalae View MSA
122789024 5272 Eudicot View MSA
122043325 5273 Angiosperm View MSA
121347950 5274 Embryophyte View MSA
123424845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain