Gene : Tp57577_TGAC_v2_gene36916 T. pratense v2
Defline:  (1 of 2) PTHR24093:SF289 - CALCIUM-TRANSPORTING ATPASE 1, ENDOPLASMIC RETICULUM-TYPE-RELATED Genomic Order:  2327
Name:  ? Tp57577_TGAC_v2_gene36916 Secondary Identifier:  ? PAC:35980823
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene36916 0.5kb upstream 0.5kb upstream 8423 true Tp57577_TGAC_v2_LG1: 19717096-19725518 Trifolium pratense
Tp57577_TGAC_v2_gene36916 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 19725019-19725518 Trifolium pratense
Tp57577_TGAC_v2_gene36916 0.5kb downstream 0.5kb downstream 8423 true Tp57577_TGAC_v2_LG1: 19716596-19725018 Trifolium pratense
Tp57577_TGAC_v2_gene36916 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 19716596-19717095 Trifolium pratense
Tp57577_TGAC_v2_gene36916 1.0kb upstream 1.0kb upstream 8923 true Tp57577_TGAC_v2_LG1: 19717096-19726018 Trifolium pratense
Tp57577_TGAC_v2_gene36916 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 19725019-19726018 Trifolium pratense
Tp57577_TGAC_v2_gene36916 1.0kb downstream 1.0kb downstream 8923 true Tp57577_TGAC_v2_LG1: 19716096-19725018 Trifolium pratense
Tp57577_TGAC_v2_gene36916 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 19716096-19717095 Trifolium pratense
Tp57577_TGAC_v2_gene36916 2.0kb upstream 2.0kb upstream 9923 true Tp57577_TGAC_v2_LG1: 19717096-19727018 Trifolium pratense
Tp57577_TGAC_v2_gene36916 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 19725019-19727018 Trifolium pratense
Tp57577_TGAC_v2_gene36916 2.0kb downstream 2.0kb downstream 9923 true Tp57577_TGAC_v2_LG1: 19715096-19725018 Trifolium pratense
Tp57577_TGAC_v2_gene36916 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 19715096-19717095 Trifolium pratense
Tp57577_TGAC_v2_gene36916 5.0kb upstream 5.0kb upstream 12923 true Tp57577_TGAC_v2_LG1: 19717096-19730018 Trifolium pratense
Tp57577_TGAC_v2_gene36916 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 19725019-19730018 Trifolium pratense
Tp57577_TGAC_v2_gene36916 5.0kb downstream 5.0kb downstream 12923 true Tp57577_TGAC_v2_LG1: 19712096-19725018 Trifolium pratense
Tp57577_TGAC_v2_gene36916 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 19712096-19717095 Trifolium pratense
Tp57577_TGAC_v2_gene36916 10.0kb upstream 10.0kb upstream 17923 true Tp57577_TGAC_v2_LG1: 19717096-19735018 Trifolium pratense
Tp57577_TGAC_v2_gene36916 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 19725019-19735018 Trifolium pratense
Tp57577_TGAC_v2_gene36916 10.0kb downstream 10.0kb downstream 17923 true Tp57577_TGAC_v2_LG1: 19707096-19725018 Trifolium pratense
Tp57577_TGAC_v2_gene36916 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 19707096-19717095 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307555 5265 Fabidae View MSA
124070166 5270 Rosid View MSA
123740324 5271 Pentapetalae View MSA
122794495 5272 Eudicot View MSA
122046254 5273 Angiosperm View MSA
121349492 5274 Embryophyte View MSA
123427421 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain