Gene : Tp57577_TGAC_v2_gene3305 T. pratense v2
Defline:  (1 of 1) PTHR24322:SF510 - ALCOHOL DEHYDROGENASE (ATA1) Genomic Order:  60
Name:  ? Tp57577_TGAC_v2_gene3305 Secondary Identifier:  ? PAC:35958727
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-695 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3305 0.5kb upstream 0.5kb upstream 6497 true Tp57577_TGAC_v2_scaf_82: 448316-454812 Trifolium pratense
Tp57577_TGAC_v2_gene3305 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_82: 448316-448815 Trifolium pratense
Tp57577_TGAC_v2_gene3305 0.5kb downstream 0.5kb downstream 6497 true Tp57577_TGAC_v2_scaf_82: 448816-455312 Trifolium pratense
Tp57577_TGAC_v2_gene3305 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_82: 454813-455312 Trifolium pratense
Tp57577_TGAC_v2_gene3305 1.0kb upstream 1.0kb upstream 6997 true Tp57577_TGAC_v2_scaf_82: 447816-454812 Trifolium pratense
Tp57577_TGAC_v2_gene3305 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_82: 447816-448815 Trifolium pratense
Tp57577_TGAC_v2_gene3305 1.0kb downstream 1.0kb downstream 6997 true Tp57577_TGAC_v2_scaf_82: 448816-455812 Trifolium pratense
Tp57577_TGAC_v2_gene3305 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_82: 454813-455812 Trifolium pratense
Tp57577_TGAC_v2_gene3305 2.0kb upstream 2.0kb upstream 7997 true Tp57577_TGAC_v2_scaf_82: 446816-454812 Trifolium pratense
Tp57577_TGAC_v2_gene3305 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_82: 446816-448815 Trifolium pratense
Tp57577_TGAC_v2_gene3305 2.0kb downstream 2.0kb downstream 7997 true Tp57577_TGAC_v2_scaf_82: 448816-456812 Trifolium pratense
Tp57577_TGAC_v2_gene3305 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_82: 454813-456812 Trifolium pratense
Tp57577_TGAC_v2_gene3305 5.0kb upstream 5.0kb upstream 10997 true Tp57577_TGAC_v2_scaf_82: 443816-454812 Trifolium pratense
Tp57577_TGAC_v2_gene3305 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_82: 443816-448815 Trifolium pratense
Tp57577_TGAC_v2_gene3305 5.0kb downstream 5.0kb downstream 10997 true Tp57577_TGAC_v2_scaf_82: 448816-459812 Trifolium pratense
Tp57577_TGAC_v2_gene3305 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_82: 454813-459812 Trifolium pratense
Tp57577_TGAC_v2_gene3305 10.0kb upstream 10.0kb upstream 15997 true Tp57577_TGAC_v2_scaf_82: 438816-454812 Trifolium pratense
Tp57577_TGAC_v2_gene3305 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_82: 438816-448815 Trifolium pratense
Tp57577_TGAC_v2_gene3305 10.0kb downstream 10.0kb downstream 15997 true Tp57577_TGAC_v2_scaf_82: 448816-464812 Trifolium pratense
Tp57577_TGAC_v2_gene3305 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_82: 454813-464812 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304604 5265 Fabidae View MSA
124061755 5270 Rosid View MSA
123748267 5271 Pentapetalae View MSA
122788265 5272 Eudicot View MSA
122042997 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain