Gene : Tp57577_TGAC_v2_gene7840 T. pratense v2
Defline:  (1 of 1) PTHR10992:SF217 - HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN Genomic Order:  26
Name:  ? Tp57577_TGAC_v2_gene7840 Secondary Identifier:  ? PAC:35976773
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LIPAS-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene7840 0.5kb upstream 0.5kb upstream 2873 true Tp57577_TGAC_v2_scaf_290: 245088-247960 Trifolium pratense
Tp57577_TGAC_v2_gene7840 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_290: 247461-247960 Trifolium pratense
Tp57577_TGAC_v2_gene7840 0.5kb downstream 0.5kb downstream 2873 true Tp57577_TGAC_v2_scaf_290: 244588-247460 Trifolium pratense
Tp57577_TGAC_v2_gene7840 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_290: 244588-245087 Trifolium pratense
Tp57577_TGAC_v2_gene7840 1.0kb upstream 1.0kb upstream 3373 true Tp57577_TGAC_v2_scaf_290: 245088-248460 Trifolium pratense
Tp57577_TGAC_v2_gene7840 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_290: 247461-248460 Trifolium pratense
Tp57577_TGAC_v2_gene7840 1.0kb downstream 1.0kb downstream 3373 true Tp57577_TGAC_v2_scaf_290: 244088-247460 Trifolium pratense
Tp57577_TGAC_v2_gene7840 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_290: 244088-245087 Trifolium pratense
Tp57577_TGAC_v2_gene7840 2.0kb upstream 2.0kb upstream 4373 true Tp57577_TGAC_v2_scaf_290: 245088-249460 Trifolium pratense
Tp57577_TGAC_v2_gene7840 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_290: 247461-249460 Trifolium pratense
Tp57577_TGAC_v2_gene7840 2.0kb downstream 2.0kb downstream 4373 true Tp57577_TGAC_v2_scaf_290: 243088-247460 Trifolium pratense
Tp57577_TGAC_v2_gene7840 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_290: 243088-245087 Trifolium pratense
Tp57577_TGAC_v2_gene7840 5.0kb upstream 5.0kb upstream 7373 true Tp57577_TGAC_v2_scaf_290: 245088-252460 Trifolium pratense
Tp57577_TGAC_v2_gene7840 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_290: 247461-252460 Trifolium pratense
Tp57577_TGAC_v2_gene7840 5.0kb downstream 5.0kb downstream 7373 true Tp57577_TGAC_v2_scaf_290: 240088-247460 Trifolium pratense
Tp57577_TGAC_v2_gene7840 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_290: 240088-245087 Trifolium pratense
Tp57577_TGAC_v2_gene7840 10.0kb upstream 10.0kb upstream 12373 true Tp57577_TGAC_v2_scaf_290: 245088-257460 Trifolium pratense
Tp57577_TGAC_v2_gene7840 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_290: 247461-257460 Trifolium pratense
Tp57577_TGAC_v2_gene7840 10.0kb downstream 10.0kb downstream 12373 true Tp57577_TGAC_v2_scaf_290: 235088-247460 Trifolium pratense
Tp57577_TGAC_v2_gene7840 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_290: 235088-245087 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301314 5265 Fabidae View MSA
124065025 5270 Rosid View MSA
123742866 5271 Pentapetalae View MSA
122790371 5272 Eudicot View MSA
122045603 5273 Angiosperm View MSA
121349939 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain