Gene : Tp57577_TGAC_v2_gene13282 T. pratense v2
Defline:  (1 of 1) K02712 - photosystem II PsbK protein (psbK) Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene13282 Secondary Identifier:  ? PAC:35982437
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13282 0.5kb upstream 0.5kb upstream 3428 true Tp57577_TGAC_v2_scaf_405: 12418-15845 Trifolium pratense
Tp57577_TGAC_v2_gene13282 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_405: 15346-15845 Trifolium pratense
Tp57577_TGAC_v2_gene13282 0.5kb downstream 0.5kb downstream 3428 true Tp57577_TGAC_v2_scaf_405: 11918-15345 Trifolium pratense
Tp57577_TGAC_v2_gene13282 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_405: 11918-12417 Trifolium pratense
Tp57577_TGAC_v2_gene13282 1.0kb upstream 1.0kb upstream 3928 true Tp57577_TGAC_v2_scaf_405: 12418-16345 Trifolium pratense
Tp57577_TGAC_v2_gene13282 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_405: 15346-16345 Trifolium pratense
Tp57577_TGAC_v2_gene13282 1.0kb downstream 1.0kb downstream 3928 true Tp57577_TGAC_v2_scaf_405: 11418-15345 Trifolium pratense
Tp57577_TGAC_v2_gene13282 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_405: 11418-12417 Trifolium pratense
Tp57577_TGAC_v2_gene13282 2.0kb upstream 2.0kb upstream 4928 true Tp57577_TGAC_v2_scaf_405: 12418-17345 Trifolium pratense
Tp57577_TGAC_v2_gene13282 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_405: 15346-17345 Trifolium pratense
Tp57577_TGAC_v2_gene13282 2.0kb downstream 2.0kb downstream 4928 true Tp57577_TGAC_v2_scaf_405: 10418-15345 Trifolium pratense
Tp57577_TGAC_v2_gene13282 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_405: 10418-12417 Trifolium pratense
Tp57577_TGAC_v2_gene13282 5.0kb upstream 5.0kb upstream 7928 true Tp57577_TGAC_v2_scaf_405: 12418-20345 Trifolium pratense
Tp57577_TGAC_v2_gene13282 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_405: 15346-20345 Trifolium pratense
Tp57577_TGAC_v2_gene13282 5.0kb downstream 5.0kb downstream 7928 true Tp57577_TGAC_v2_scaf_405: 7418-15345 Trifolium pratense
Tp57577_TGAC_v2_gene13282 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_405: 7418-12417 Trifolium pratense
Tp57577_TGAC_v2_gene13282 10.0kb upstream 10.0kb upstream 12928 true Tp57577_TGAC_v2_scaf_405: 12418-25345 Trifolium pratense
Tp57577_TGAC_v2_gene13282 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_405: 15346-25345 Trifolium pratense
Tp57577_TGAC_v2_gene13282 10.0kb downstream 10.0kb downstream 12928 true Tp57577_TGAC_v2_scaf_405: 2418-15345 Trifolium pratense
Tp57577_TGAC_v2_gene13282 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_405: 2418-12417 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027256 5273 Angiosperm View MSA
122313847 5265 Fabidae View MSA
124037971 5270 Rosid View MSA
123744134 5271 Pentapetalae View MSA
122797733 5272 Eudicot View MSA
121296936 5274 Embryophyte View MSA
123426665 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain