Gene : Tp57577_TGAC_v2_gene5522 T. pratense v2
Defline:  (1 of 1) PTHR12725//PTHR12725:SF81 - HALOACID DEHALOGENASE-LIKE HYDROLASE // SUBFAMILY NOT NAMED Genomic Order:  185
Name:  ? Tp57577_TGAC_v2_gene5522 Secondary Identifier:  ? PAC:35979504
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7204 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5522 0.5kb upstream 0.5kb upstream 3713 true Tp57577_TGAC_v2_LG1: 1312893-1316605 Trifolium pratense
Tp57577_TGAC_v2_gene5522 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 1312893-1313392 Trifolium pratense
Tp57577_TGAC_v2_gene5522 0.5kb downstream 0.5kb downstream 3713 true Tp57577_TGAC_v2_LG1: 1313393-1317105 Trifolium pratense
Tp57577_TGAC_v2_gene5522 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 1316606-1317105 Trifolium pratense
Tp57577_TGAC_v2_gene5522 1.0kb upstream 1.0kb upstream 4213 true Tp57577_TGAC_v2_LG1: 1312393-1316605 Trifolium pratense
Tp57577_TGAC_v2_gene5522 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 1312393-1313392 Trifolium pratense
Tp57577_TGAC_v2_gene5522 1.0kb downstream 1.0kb downstream 4213 true Tp57577_TGAC_v2_LG1: 1313393-1317605 Trifolium pratense
Tp57577_TGAC_v2_gene5522 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 1316606-1317605 Trifolium pratense
Tp57577_TGAC_v2_gene5522 2.0kb upstream 2.0kb upstream 5213 true Tp57577_TGAC_v2_LG1: 1311393-1316605 Trifolium pratense
Tp57577_TGAC_v2_gene5522 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 1311393-1313392 Trifolium pratense
Tp57577_TGAC_v2_gene5522 2.0kb downstream 2.0kb downstream 5213 true Tp57577_TGAC_v2_LG1: 1313393-1318605 Trifolium pratense
Tp57577_TGAC_v2_gene5522 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 1316606-1318605 Trifolium pratense
Tp57577_TGAC_v2_gene5522 5.0kb upstream 5.0kb upstream 8213 true Tp57577_TGAC_v2_LG1: 1308393-1316605 Trifolium pratense
Tp57577_TGAC_v2_gene5522 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 1308393-1313392 Trifolium pratense
Tp57577_TGAC_v2_gene5522 5.0kb downstream 5.0kb downstream 8213 true Tp57577_TGAC_v2_LG1: 1313393-1321605 Trifolium pratense
Tp57577_TGAC_v2_gene5522 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 1316606-1321605 Trifolium pratense
Tp57577_TGAC_v2_gene5522 10.0kb upstream 10.0kb upstream 13213 true Tp57577_TGAC_v2_LG1: 1303393-1316605 Trifolium pratense
Tp57577_TGAC_v2_gene5522 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 1303393-1313392 Trifolium pratense
Tp57577_TGAC_v2_gene5522 10.0kb downstream 10.0kb downstream 13213 true Tp57577_TGAC_v2_LG1: 1313393-1326605 Trifolium pratense
Tp57577_TGAC_v2_gene5522 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 1316606-1326605 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309216 5265 Fabidae View MSA
124062962 5270 Rosid View MSA
123740146 5271 Pentapetalae View MSA
122790968 5272 Eudicot View MSA
122048898 5273 Angiosperm View MSA
121311158 5274 Embryophyte View MSA
123426890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain