Gene : Tp57577_TGAC_v2_gene5545 T. pratense v2
Defline:  (1 of 10) PTHR23500:SF70 - SUGAR TRANSPORT PROTEIN 13 Genomic Order:  191
Name:  ? Tp57577_TGAC_v2_gene5545 Secondary Identifier:  ? PAC:35978120
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5545 0.5kb upstream 0.5kb upstream 3065 true Tp57577_TGAC_v2_LG1: 1366533-1369597 Trifolium pratense
Tp57577_TGAC_v2_gene5545 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 1366533-1367032 Trifolium pratense
Tp57577_TGAC_v2_gene5545 0.5kb downstream 0.5kb downstream 3065 true Tp57577_TGAC_v2_LG1: 1367033-1370097 Trifolium pratense
Tp57577_TGAC_v2_gene5545 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 1369598-1370097 Trifolium pratense
Tp57577_TGAC_v2_gene5545 1.0kb upstream 1.0kb upstream 3565 true Tp57577_TGAC_v2_LG1: 1366033-1369597 Trifolium pratense
Tp57577_TGAC_v2_gene5545 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 1366033-1367032 Trifolium pratense
Tp57577_TGAC_v2_gene5545 1.0kb downstream 1.0kb downstream 3565 true Tp57577_TGAC_v2_LG1: 1367033-1370597 Trifolium pratense
Tp57577_TGAC_v2_gene5545 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 1369598-1370597 Trifolium pratense
Tp57577_TGAC_v2_gene5545 2.0kb upstream 2.0kb upstream 4565 true Tp57577_TGAC_v2_LG1: 1365033-1369597 Trifolium pratense
Tp57577_TGAC_v2_gene5545 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 1365033-1367032 Trifolium pratense
Tp57577_TGAC_v2_gene5545 2.0kb downstream 2.0kb downstream 4565 true Tp57577_TGAC_v2_LG1: 1367033-1371597 Trifolium pratense
Tp57577_TGAC_v2_gene5545 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 1369598-1371597 Trifolium pratense
Tp57577_TGAC_v2_gene5545 5.0kb upstream 5.0kb upstream 7565 true Tp57577_TGAC_v2_LG1: 1362033-1369597 Trifolium pratense
Tp57577_TGAC_v2_gene5545 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 1362033-1367032 Trifolium pratense
Tp57577_TGAC_v2_gene5545 5.0kb downstream 5.0kb downstream 7565 true Tp57577_TGAC_v2_LG1: 1367033-1374597 Trifolium pratense
Tp57577_TGAC_v2_gene5545 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 1369598-1374597 Trifolium pratense
Tp57577_TGAC_v2_gene5545 10.0kb upstream 10.0kb upstream 12565 true Tp57577_TGAC_v2_LG1: 1357033-1369597 Trifolium pratense
Tp57577_TGAC_v2_gene5545 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 1357033-1367032 Trifolium pratense
Tp57577_TGAC_v2_gene5545 10.0kb downstream 10.0kb downstream 12565 true Tp57577_TGAC_v2_LG1: 1367033-1379597 Trifolium pratense
Tp57577_TGAC_v2_gene5545 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 1369598-1379597 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316409 5265 Fabidae View MSA
124040581 5270 Rosid View MSA
123747169 5271 Pentapetalae View MSA
122795547 5272 Eudicot View MSA
122051255 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121350723 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain