Gene : Tp57577_TGAC_v2_gene11140 T. pratense v2
Defline:  (1 of 509) PF13041 - PPR repeat family (PPR_2) Genomic Order:  24
Name:  ? Tp57577_TGAC_v2_gene11140 Secondary Identifier:  ? PAC:35962827
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11140 0.5kb upstream 0.5kb upstream 5842 true Tp57577_TGAC_v2_scaf_450: 169824-175665 Trifolium pratense
Tp57577_TGAC_v2_gene11140 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_450: 169824-170323 Trifolium pratense
Tp57577_TGAC_v2_gene11140 0.5kb downstream 0.5kb downstream 5842 true Tp57577_TGAC_v2_scaf_450: 170324-176165 Trifolium pratense
Tp57577_TGAC_v2_gene11140 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_450: 175666-176165 Trifolium pratense
Tp57577_TGAC_v2_gene11140 1.0kb upstream 1.0kb upstream 6342 true Tp57577_TGAC_v2_scaf_450: 169324-175665 Trifolium pratense
Tp57577_TGAC_v2_gene11140 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_450: 169324-170323 Trifolium pratense
Tp57577_TGAC_v2_gene11140 1.0kb downstream 1.0kb downstream 6342 true Tp57577_TGAC_v2_scaf_450: 170324-176665 Trifolium pratense
Tp57577_TGAC_v2_gene11140 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_450: 175666-176665 Trifolium pratense
Tp57577_TGAC_v2_gene11140 2.0kb upstream 2.0kb upstream 7342 true Tp57577_TGAC_v2_scaf_450: 168324-175665 Trifolium pratense
Tp57577_TGAC_v2_gene11140 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_450: 168324-170323 Trifolium pratense
Tp57577_TGAC_v2_gene11140 2.0kb downstream 2.0kb downstream 7342 true Tp57577_TGAC_v2_scaf_450: 170324-177665 Trifolium pratense
Tp57577_TGAC_v2_gene11140 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_450: 175666-177665 Trifolium pratense
Tp57577_TGAC_v2_gene11140 5.0kb upstream 5.0kb upstream 10342 true Tp57577_TGAC_v2_scaf_450: 165324-175665 Trifolium pratense
Tp57577_TGAC_v2_gene11140 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_450: 165324-170323 Trifolium pratense
Tp57577_TGAC_v2_gene11140 5.0kb downstream 5.0kb downstream 10342 true Tp57577_TGAC_v2_scaf_450: 170324-180665 Trifolium pratense
Tp57577_TGAC_v2_gene11140 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_450: 175666-180665 Trifolium pratense
Tp57577_TGAC_v2_gene11140 10.0kb upstream 10.0kb upstream 15342 true Tp57577_TGAC_v2_scaf_450: 160324-175665 Trifolium pratense
Tp57577_TGAC_v2_gene11140 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_450: 160324-170323 Trifolium pratense
Tp57577_TGAC_v2_gene11140 10.0kb downstream 10.0kb downstream 15342 true Tp57577_TGAC_v2_scaf_450: 170324-185665 Trifolium pratense
Tp57577_TGAC_v2_gene11140 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_450: 175666-185665 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300181 5265 Fabidae View MSA
124063635 5270 Rosid View MSA
123750862 5271 Pentapetalae View MSA
122792992 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain