Gene : Tp57577_TGAC_v2_gene19861 T. pratense v2
Defline:  (1 of 2) PTHR31412:SF5 - ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED Genomic Order:  4
Name:  ? Tp57577_TGAC_v2_gene19861 Secondary Identifier:  ? PAC:35962717
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19861 0.5kb upstream 0.5kb upstream 6797 true Tp57577_TGAC_v2_scaf_322: 35729-42525 Trifolium pratense
Tp57577_TGAC_v2_gene19861 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_322: 42026-42525 Trifolium pratense
Tp57577_TGAC_v2_gene19861 0.5kb downstream 0.5kb downstream 6797 true Tp57577_TGAC_v2_scaf_322: 35229-42025 Trifolium pratense
Tp57577_TGAC_v2_gene19861 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_322: 35229-35728 Trifolium pratense
Tp57577_TGAC_v2_gene19861 1.0kb upstream 1.0kb upstream 7297 true Tp57577_TGAC_v2_scaf_322: 35729-43025 Trifolium pratense
Tp57577_TGAC_v2_gene19861 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_322: 42026-43025 Trifolium pratense
Tp57577_TGAC_v2_gene19861 1.0kb downstream 1.0kb downstream 7297 true Tp57577_TGAC_v2_scaf_322: 34729-42025 Trifolium pratense
Tp57577_TGAC_v2_gene19861 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_322: 34729-35728 Trifolium pratense
Tp57577_TGAC_v2_gene19861 2.0kb upstream 2.0kb upstream 8297 true Tp57577_TGAC_v2_scaf_322: 35729-44025 Trifolium pratense
Tp57577_TGAC_v2_gene19861 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_322: 42026-44025 Trifolium pratense
Tp57577_TGAC_v2_gene19861 2.0kb downstream 2.0kb downstream 8297 true Tp57577_TGAC_v2_scaf_322: 33729-42025 Trifolium pratense
Tp57577_TGAC_v2_gene19861 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_322: 33729-35728 Trifolium pratense
Tp57577_TGAC_v2_gene19861 5.0kb upstream 5.0kb upstream 11297 true Tp57577_TGAC_v2_scaf_322: 35729-47025 Trifolium pratense
Tp57577_TGAC_v2_gene19861 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_322: 42026-47025 Trifolium pratense
Tp57577_TGAC_v2_gene19861 5.0kb downstream 5.0kb downstream 11297 true Tp57577_TGAC_v2_scaf_322: 30729-42025 Trifolium pratense
Tp57577_TGAC_v2_gene19861 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_322: 30729-35728 Trifolium pratense
Tp57577_TGAC_v2_gene19861 10.0kb upstream 10.0kb upstream 16297 true Tp57577_TGAC_v2_scaf_322: 35729-52025 Trifolium pratense
Tp57577_TGAC_v2_gene19861 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_322: 42026-52025 Trifolium pratense
Tp57577_TGAC_v2_gene19861 10.0kb downstream 10.0kb downstream 16297 true Tp57577_TGAC_v2_scaf_322: 25729-42025 Trifolium pratense
Tp57577_TGAC_v2_gene19861 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_322: 25729-35728 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301078 5265 Fabidae View MSA
124061333 5270 Rosid View MSA
123739814 5271 Pentapetalae View MSA
122788407 5272 Eudicot View MSA
122044367 5273 Angiosperm View MSA
121345535 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain