Gene : Tp57577_TGAC_v2_gene17877 T. pratense v2
Defline:  (1 of 3) PTHR24411:SF35 - BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene17877 Secondary Identifier:  ? PAC:35954490
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17877 0.5kb upstream 0.5kb upstream 5962 true Tp57577_TGAC_v2_scaf_366: 2404-8365 Trifolium pratense
Tp57577_TGAC_v2_gene17877 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_366: 7866-8365 Trifolium pratense
Tp57577_TGAC_v2_gene17877 0.5kb downstream 0.5kb downstream 5962 true Tp57577_TGAC_v2_scaf_366: 1904-7865 Trifolium pratense
Tp57577_TGAC_v2_gene17877 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_366: 1904-2403 Trifolium pratense
Tp57577_TGAC_v2_gene17877 1.0kb upstream 1.0kb upstream 6462 true Tp57577_TGAC_v2_scaf_366: 2404-8865 Trifolium pratense
Tp57577_TGAC_v2_gene17877 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_366: 7866-8865 Trifolium pratense
Tp57577_TGAC_v2_gene17877 1.0kb downstream 1.0kb downstream 6462 true Tp57577_TGAC_v2_scaf_366: 1404-7865 Trifolium pratense
Tp57577_TGAC_v2_gene17877 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_366: 1404-2403 Trifolium pratense
Tp57577_TGAC_v2_gene17877 2.0kb upstream 2.0kb upstream 7462 true Tp57577_TGAC_v2_scaf_366: 2404-9865 Trifolium pratense
Tp57577_TGAC_v2_gene17877 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_366: 7866-9865 Trifolium pratense
Tp57577_TGAC_v2_gene17877 2.0kb downstream 2.0kb downstream 7462 true Tp57577_TGAC_v2_scaf_366: 404-7865 Trifolium pratense
Tp57577_TGAC_v2_gene17877 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_366: 404-2403 Trifolium pratense
Tp57577_TGAC_v2_gene17877 5.0kb upstream 5.0kb upstream 10462 true Tp57577_TGAC_v2_scaf_366: 2404-12865 Trifolium pratense
Tp57577_TGAC_v2_gene17877 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_366: 7866-12865 Trifolium pratense
Tp57577_TGAC_v2_gene17877 5.0kb downstream 5.0kb downstream 7865 true Tp57577_TGAC_v2_scaf_366: 1-7865 Trifolium pratense
Tp57577_TGAC_v2_gene17877 5.0kb downstream 5.0kb downstream 2403 false Tp57577_TGAC_v2_scaf_366: 1-2403 Trifolium pratense
Tp57577_TGAC_v2_gene17877 10.0kb upstream 10.0kb upstream 15462 true Tp57577_TGAC_v2_scaf_366: 2404-17865 Trifolium pratense
Tp57577_TGAC_v2_gene17877 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_366: 7866-17865 Trifolium pratense
Tp57577_TGAC_v2_gene17877 10.0kb downstream 10.0kb downstream 7865 true Tp57577_TGAC_v2_scaf_366: 1-7865 Trifolium pratense
Tp57577_TGAC_v2_gene17877 10.0kb downstream 10.0kb downstream 2403 false Tp57577_TGAC_v2_scaf_366: 1-2403 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041251 5273 Angiosperm View MSA
122307316 5265 Fabidae View MSA
124061279 5270 Rosid View MSA
123740523 5271 Pentapetalae View MSA
122790059 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain