Gene : Tp57577_TGAC_v2_gene30387 T. pratense v2
Defline:  (1 of 2) PTHR11206:SF79 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  11
Name:  ? Tp57577_TGAC_v2_gene30387 Secondary Identifier:  ? PAC:35977124
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30387 0.5kb upstream 0.5kb upstream 11158 true Tp57577_TGAC_v2_scaf_749: 94076-105233 Trifolium pratense
Tp57577_TGAC_v2_gene30387 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_749: 94076-94575 Trifolium pratense
Tp57577_TGAC_v2_gene30387 0.5kb downstream 0.5kb downstream 11158 true Tp57577_TGAC_v2_scaf_749: 94576-105733 Trifolium pratense
Tp57577_TGAC_v2_gene30387 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_749: 105234-105733 Trifolium pratense
Tp57577_TGAC_v2_gene30387 1.0kb upstream 1.0kb upstream 11658 true Tp57577_TGAC_v2_scaf_749: 93576-105233 Trifolium pratense
Tp57577_TGAC_v2_gene30387 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_749: 93576-94575 Trifolium pratense
Tp57577_TGAC_v2_gene30387 1.0kb downstream 1.0kb downstream 11658 true Tp57577_TGAC_v2_scaf_749: 94576-106233 Trifolium pratense
Tp57577_TGAC_v2_gene30387 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_749: 105234-106233 Trifolium pratense
Tp57577_TGAC_v2_gene30387 2.0kb upstream 2.0kb upstream 12658 true Tp57577_TGAC_v2_scaf_749: 92576-105233 Trifolium pratense
Tp57577_TGAC_v2_gene30387 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_749: 92576-94575 Trifolium pratense
Tp57577_TGAC_v2_gene30387 2.0kb downstream 2.0kb downstream 12007 true Tp57577_TGAC_v2_scaf_749: 94576-106582 Trifolium pratense
Tp57577_TGAC_v2_gene30387 2.0kb downstream 2.0kb downstream 1349 false Tp57577_TGAC_v2_scaf_749: 105234-106582 Trifolium pratense
Tp57577_TGAC_v2_gene30387 5.0kb upstream 5.0kb upstream 15658 true Tp57577_TGAC_v2_scaf_749: 89576-105233 Trifolium pratense
Tp57577_TGAC_v2_gene30387 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_749: 89576-94575 Trifolium pratense
Tp57577_TGAC_v2_gene30387 5.0kb downstream 5.0kb downstream 12007 true Tp57577_TGAC_v2_scaf_749: 94576-106582 Trifolium pratense
Tp57577_TGAC_v2_gene30387 5.0kb downstream 5.0kb downstream 1349 false Tp57577_TGAC_v2_scaf_749: 105234-106582 Trifolium pratense
Tp57577_TGAC_v2_gene30387 10.0kb upstream 10.0kb upstream 20658 true Tp57577_TGAC_v2_scaf_749: 84576-105233 Trifolium pratense
Tp57577_TGAC_v2_gene30387 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_749: 84576-94575 Trifolium pratense
Tp57577_TGAC_v2_gene30387 10.0kb downstream 10.0kb downstream 12007 true Tp57577_TGAC_v2_scaf_749: 94576-106582 Trifolium pratense
Tp57577_TGAC_v2_gene30387 10.0kb downstream 10.0kb downstream 1349 false Tp57577_TGAC_v2_scaf_749: 105234-106582 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301385 5265 Fabidae View MSA
124068110 5270 Rosid View MSA
123753109 5271 Pentapetalae View MSA
122797339 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain