Gene : Tp57577_TGAC_v2_gene30539 T. pratense v2
Defline:  (1 of 11) PF04759 - Protein of unknown function, DUF617 (DUF617) Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene30539 Secondary Identifier:  ? PAC:35986419
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30539 0.5kb upstream 0.5kb upstream 1347 true Tp57577_TGAC_v2_scaf_493: 38019-39365 Trifolium pratense
Tp57577_TGAC_v2_gene30539 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_493: 38866-39365 Trifolium pratense
Tp57577_TGAC_v2_gene30539 0.5kb downstream 0.5kb downstream 1347 true Tp57577_TGAC_v2_scaf_493: 37519-38865 Trifolium pratense
Tp57577_TGAC_v2_gene30539 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_493: 37519-38018 Trifolium pratense
Tp57577_TGAC_v2_gene30539 1.0kb upstream 1.0kb upstream 1847 true Tp57577_TGAC_v2_scaf_493: 38019-39865 Trifolium pratense
Tp57577_TGAC_v2_gene30539 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_493: 38866-39865 Trifolium pratense
Tp57577_TGAC_v2_gene30539 1.0kb downstream 1.0kb downstream 1847 true Tp57577_TGAC_v2_scaf_493: 37019-38865 Trifolium pratense
Tp57577_TGAC_v2_gene30539 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_493: 37019-38018 Trifolium pratense
Tp57577_TGAC_v2_gene30539 2.0kb upstream 2.0kb upstream 2847 true Tp57577_TGAC_v2_scaf_493: 38019-40865 Trifolium pratense
Tp57577_TGAC_v2_gene30539 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_493: 38866-40865 Trifolium pratense
Tp57577_TGAC_v2_gene30539 2.0kb downstream 2.0kb downstream 2847 true Tp57577_TGAC_v2_scaf_493: 36019-38865 Trifolium pratense
Tp57577_TGAC_v2_gene30539 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_493: 36019-38018 Trifolium pratense
Tp57577_TGAC_v2_gene30539 5.0kb upstream 5.0kb upstream 5847 true Tp57577_TGAC_v2_scaf_493: 38019-43865 Trifolium pratense
Tp57577_TGAC_v2_gene30539 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_493: 38866-43865 Trifolium pratense
Tp57577_TGAC_v2_gene30539 5.0kb downstream 5.0kb downstream 5847 true Tp57577_TGAC_v2_scaf_493: 33019-38865 Trifolium pratense
Tp57577_TGAC_v2_gene30539 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_493: 33019-38018 Trifolium pratense
Tp57577_TGAC_v2_gene30539 10.0kb upstream 10.0kb upstream 10847 true Tp57577_TGAC_v2_scaf_493: 38019-48865 Trifolium pratense
Tp57577_TGAC_v2_gene30539 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_493: 38866-48865 Trifolium pratense
Tp57577_TGAC_v2_gene30539 10.0kb downstream 10.0kb downstream 10847 true Tp57577_TGAC_v2_scaf_493: 28019-38865 Trifolium pratense
Tp57577_TGAC_v2_gene30539 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_493: 28019-38018 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310217 5265 Fabidae View MSA
124068431 5270 Rosid View MSA
123751387 5271 Pentapetalae View MSA
122796767 5272 Eudicot View MSA
122047033 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain