Gene : Tp57577_TGAC_v2_gene28283 T. pratense v2
Defline:  (1 of 1) KOG4652 - HORMA domain Genomic Order:  15
Name:  ? Tp57577_TGAC_v2_gene28283 Secondary Identifier:  ? PAC:35959710
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28283 0.5kb upstream 0.5kb upstream 5989 true Tp57577_TGAC_v2_scaf_888: 75266-81254 Trifolium pratense
Tp57577_TGAC_v2_gene28283 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_888: 75266-75765 Trifolium pratense
Tp57577_TGAC_v2_gene28283 0.5kb downstream 0.5kb downstream 5989 true Tp57577_TGAC_v2_scaf_888: 75766-81754 Trifolium pratense
Tp57577_TGAC_v2_gene28283 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_888: 81255-81754 Trifolium pratense
Tp57577_TGAC_v2_gene28283 1.0kb upstream 1.0kb upstream 6489 true Tp57577_TGAC_v2_scaf_888: 74766-81254 Trifolium pratense
Tp57577_TGAC_v2_gene28283 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_888: 74766-75765 Trifolium pratense
Tp57577_TGAC_v2_gene28283 1.0kb downstream 1.0kb downstream 6340 true Tp57577_TGAC_v2_scaf_888: 75766-82105 Trifolium pratense
Tp57577_TGAC_v2_gene28283 1.0kb downstream 1.0kb downstream 851 false Tp57577_TGAC_v2_scaf_888: 81255-82105 Trifolium pratense
Tp57577_TGAC_v2_gene28283 2.0kb upstream 2.0kb upstream 7489 true Tp57577_TGAC_v2_scaf_888: 73766-81254 Trifolium pratense
Tp57577_TGAC_v2_gene28283 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_888: 73766-75765 Trifolium pratense
Tp57577_TGAC_v2_gene28283 2.0kb downstream 2.0kb downstream 6340 true Tp57577_TGAC_v2_scaf_888: 75766-82105 Trifolium pratense
Tp57577_TGAC_v2_gene28283 2.0kb downstream 2.0kb downstream 851 false Tp57577_TGAC_v2_scaf_888: 81255-82105 Trifolium pratense
Tp57577_TGAC_v2_gene28283 5.0kb upstream 5.0kb upstream 10489 true Tp57577_TGAC_v2_scaf_888: 70766-81254 Trifolium pratense
Tp57577_TGAC_v2_gene28283 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_888: 70766-75765 Trifolium pratense
Tp57577_TGAC_v2_gene28283 5.0kb downstream 5.0kb downstream 6340 true Tp57577_TGAC_v2_scaf_888: 75766-82105 Trifolium pratense
Tp57577_TGAC_v2_gene28283 5.0kb downstream 5.0kb downstream 851 false Tp57577_TGAC_v2_scaf_888: 81255-82105 Trifolium pratense
Tp57577_TGAC_v2_gene28283 10.0kb upstream 10.0kb upstream 15489 true Tp57577_TGAC_v2_scaf_888: 65766-81254 Trifolium pratense
Tp57577_TGAC_v2_gene28283 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_888: 65766-75765 Trifolium pratense
Tp57577_TGAC_v2_gene28283 10.0kb downstream 10.0kb downstream 6340 true Tp57577_TGAC_v2_scaf_888: 75766-82105 Trifolium pratense
Tp57577_TGAC_v2_gene28283 10.0kb downstream 10.0kb downstream 851 false Tp57577_TGAC_v2_scaf_888: 81255-82105 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041471 5273 Angiosperm View MSA
122309830 5265 Fabidae View MSA
124067688 5270 Rosid View MSA
123740838 5271 Pentapetalae View MSA
122791726 5272 Eudicot View MSA
123429135 5275 Viridiplantae View MSA
121347816 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain