Gene : Tp57577_TGAC_v2_gene14352 T. pratense v2
Defline:  (1 of 34) PF05678 - VQ motif (VQ) Genomic Order:  16
Name:  ? Tp57577_TGAC_v2_gene14352 Secondary Identifier:  ? PAC:35959520
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene14352 0.5kb upstream 0.5kb upstream 2325 true Tp57577_TGAC_v2_scaf_430: 183306-185630 Trifolium pratense
Tp57577_TGAC_v2_gene14352 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_430: 183306-183805 Trifolium pratense
Tp57577_TGAC_v2_gene14352 0.5kb downstream 0.5kb downstream 2325 true Tp57577_TGAC_v2_scaf_430: 183806-186130 Trifolium pratense
Tp57577_TGAC_v2_gene14352 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_430: 185631-186130 Trifolium pratense
Tp57577_TGAC_v2_gene14352 1.0kb upstream 1.0kb upstream 2825 true Tp57577_TGAC_v2_scaf_430: 182806-185630 Trifolium pratense
Tp57577_TGAC_v2_gene14352 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_430: 182806-183805 Trifolium pratense
Tp57577_TGAC_v2_gene14352 1.0kb downstream 1.0kb downstream 2825 true Tp57577_TGAC_v2_scaf_430: 183806-186630 Trifolium pratense
Tp57577_TGAC_v2_gene14352 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_430: 185631-186630 Trifolium pratense
Tp57577_TGAC_v2_gene14352 2.0kb upstream 2.0kb upstream 3825 true Tp57577_TGAC_v2_scaf_430: 181806-185630 Trifolium pratense
Tp57577_TGAC_v2_gene14352 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_430: 181806-183805 Trifolium pratense
Tp57577_TGAC_v2_gene14352 2.0kb downstream 2.0kb downstream 3825 true Tp57577_TGAC_v2_scaf_430: 183806-187630 Trifolium pratense
Tp57577_TGAC_v2_gene14352 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_430: 185631-187630 Trifolium pratense
Tp57577_TGAC_v2_gene14352 5.0kb upstream 5.0kb upstream 6825 true Tp57577_TGAC_v2_scaf_430: 178806-185630 Trifolium pratense
Tp57577_TGAC_v2_gene14352 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_430: 178806-183805 Trifolium pratense
Tp57577_TGAC_v2_gene14352 5.0kb downstream 5.0kb downstream 6825 true Tp57577_TGAC_v2_scaf_430: 183806-190630 Trifolium pratense
Tp57577_TGAC_v2_gene14352 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_430: 185631-190630 Trifolium pratense
Tp57577_TGAC_v2_gene14352 10.0kb upstream 10.0kb upstream 11825 true Tp57577_TGAC_v2_scaf_430: 173806-185630 Trifolium pratense
Tp57577_TGAC_v2_gene14352 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_430: 173806-183805 Trifolium pratense
Tp57577_TGAC_v2_gene14352 10.0kb downstream 10.0kb downstream 11825 true Tp57577_TGAC_v2_scaf_430: 183806-195630 Trifolium pratense
Tp57577_TGAC_v2_gene14352 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_430: 185631-195630 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309089 5265 Fabidae View MSA
124069975 5270 Rosid View MSA
123750267 5271 Pentapetalae View MSA
122794981 5272 Eudicot View MSA
122048174 5273 Angiosperm View MSA
121350948 5274 Embryophyte View MSA
123381944 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain