Gene : Tp57577_TGAC_v2_gene13717 T. pratense v2
Defline:  (1 of 2) PTHR31065:SF15 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  10
Name:  ? Tp57577_TGAC_v2_gene13717 Secondary Identifier:  ? PAC:35985212
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13717 0.5kb upstream 0.5kb upstream 1969 true Tp57577_TGAC_v2_scaf_421: 69347-71315 Trifolium pratense
Tp57577_TGAC_v2_gene13717 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_421: 70816-71315 Trifolium pratense
Tp57577_TGAC_v2_gene13717 0.5kb downstream 0.5kb downstream 1969 true Tp57577_TGAC_v2_scaf_421: 68847-70815 Trifolium pratense
Tp57577_TGAC_v2_gene13717 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_421: 68847-69346 Trifolium pratense
Tp57577_TGAC_v2_gene13717 1.0kb upstream 1.0kb upstream 2469 true Tp57577_TGAC_v2_scaf_421: 69347-71815 Trifolium pratense
Tp57577_TGAC_v2_gene13717 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_421: 70816-71815 Trifolium pratense
Tp57577_TGAC_v2_gene13717 1.0kb downstream 1.0kb downstream 2469 true Tp57577_TGAC_v2_scaf_421: 68347-70815 Trifolium pratense
Tp57577_TGAC_v2_gene13717 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_421: 68347-69346 Trifolium pratense
Tp57577_TGAC_v2_gene13717 2.0kb upstream 2.0kb upstream 3469 true Tp57577_TGAC_v2_scaf_421: 69347-72815 Trifolium pratense
Tp57577_TGAC_v2_gene13717 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_421: 70816-72815 Trifolium pratense
Tp57577_TGAC_v2_gene13717 2.0kb downstream 2.0kb downstream 3469 true Tp57577_TGAC_v2_scaf_421: 67347-70815 Trifolium pratense
Tp57577_TGAC_v2_gene13717 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_421: 67347-69346 Trifolium pratense
Tp57577_TGAC_v2_gene13717 5.0kb upstream 5.0kb upstream 6469 true Tp57577_TGAC_v2_scaf_421: 69347-75815 Trifolium pratense
Tp57577_TGAC_v2_gene13717 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_421: 70816-75815 Trifolium pratense
Tp57577_TGAC_v2_gene13717 5.0kb downstream 5.0kb downstream 6469 true Tp57577_TGAC_v2_scaf_421: 64347-70815 Trifolium pratense
Tp57577_TGAC_v2_gene13717 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_421: 64347-69346 Trifolium pratense
Tp57577_TGAC_v2_gene13717 10.0kb upstream 10.0kb upstream 11469 true Tp57577_TGAC_v2_scaf_421: 69347-80815 Trifolium pratense
Tp57577_TGAC_v2_gene13717 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_421: 70816-80815 Trifolium pratense
Tp57577_TGAC_v2_gene13717 10.0kb downstream 10.0kb downstream 11469 true Tp57577_TGAC_v2_scaf_421: 59347-70815 Trifolium pratense
Tp57577_TGAC_v2_gene13717 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_421: 59347-69346 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791790 5273 Angiosperm View MSA
122316073 5265 Fabidae View MSA
124037041 5270 Rosid View MSA
123743284 5271 Pentapetalae View MSA
122793533 5272 Eudicot View MSA
121063080 5274 Embryophyte View MSA
123102864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain