Gene : Tp57577_TGAC_v2_gene23129 T. pratense v2
Defline:  (1 of 3) PTHR22572:SF101 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE SMALL SUBUNIT, CHLOROPLASTIC Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene23129 Secondary Identifier:  ? PAC:35953423
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLYCOGENSYNTH-PWY Trifolium pratense pathologic  
Tpratense PWY-622 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23129 0.5kb upstream 0.5kb upstream 4071 true Tp57577_TGAC_v2_scaf_994: 35839-39909 Trifolium pratense
Tp57577_TGAC_v2_gene23129 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_994: 35839-36338 Trifolium pratense
Tp57577_TGAC_v2_gene23129 0.5kb downstream 0.5kb downstream 4071 true Tp57577_TGAC_v2_scaf_994: 36339-40409 Trifolium pratense
Tp57577_TGAC_v2_gene23129 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_994: 39910-40409 Trifolium pratense
Tp57577_TGAC_v2_gene23129 1.0kb upstream 1.0kb upstream 4571 true Tp57577_TGAC_v2_scaf_994: 35339-39909 Trifolium pratense
Tp57577_TGAC_v2_gene23129 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_994: 35339-36338 Trifolium pratense
Tp57577_TGAC_v2_gene23129 1.0kb downstream 1.0kb downstream 4571 true Tp57577_TGAC_v2_scaf_994: 36339-40909 Trifolium pratense
Tp57577_TGAC_v2_gene23129 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_994: 39910-40909 Trifolium pratense
Tp57577_TGAC_v2_gene23129 2.0kb upstream 2.0kb upstream 5571 true Tp57577_TGAC_v2_scaf_994: 34339-39909 Trifolium pratense
Tp57577_TGAC_v2_gene23129 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_994: 34339-36338 Trifolium pratense
Tp57577_TGAC_v2_gene23129 2.0kb downstream 2.0kb downstream 5571 true Tp57577_TGAC_v2_scaf_994: 36339-41909 Trifolium pratense
Tp57577_TGAC_v2_gene23129 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_994: 39910-41909 Trifolium pratense
Tp57577_TGAC_v2_gene23129 5.0kb upstream 5.0kb upstream 8571 true Tp57577_TGAC_v2_scaf_994: 31339-39909 Trifolium pratense
Tp57577_TGAC_v2_gene23129 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_994: 31339-36338 Trifolium pratense
Tp57577_TGAC_v2_gene23129 5.0kb downstream 5.0kb downstream 8571 true Tp57577_TGAC_v2_scaf_994: 36339-44909 Trifolium pratense
Tp57577_TGAC_v2_gene23129 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_994: 39910-44909 Trifolium pratense
Tp57577_TGAC_v2_gene23129 10.0kb upstream 10.0kb upstream 13571 true Tp57577_TGAC_v2_scaf_994: 26339-39909 Trifolium pratense
Tp57577_TGAC_v2_gene23129 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_994: 26339-36338 Trifolium pratense
Tp57577_TGAC_v2_gene23129 10.0kb downstream 10.0kb downstream 13571 true Tp57577_TGAC_v2_scaf_994: 36339-49909 Trifolium pratense
Tp57577_TGAC_v2_gene23129 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_994: 39910-49909 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305164 5265 Fabidae View MSA
124067564 5270 Rosid View MSA
123737587 5271 Pentapetalae View MSA
122787627 5272 Eudicot View MSA
122044250 5273 Angiosperm View MSA
121350002 5274 Embryophyte View MSA
123424956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain