Gene : Tp57577_TGAC_v2_gene18300 T. pratense v2

Defline:  (1 of 3) K04523 - ubiquilin (UBQLN, DSK2) Genomic Order:  14
Name:  ? Tp57577_TGAC_v2_gene18300 Secondary Identifier:  ? PAC:35977078

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene18300 0.5kb upstream 0.5kb upstream 5649 true Tp57577_TGAC_v2_scaf_358: 156561-162209 Trifolium pratense
Tp57577_TGAC_v2_gene18300 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_358: 161710-162209 Trifolium pratense
Tp57577_TGAC_v2_gene18300 0.5kb downstream 0.5kb downstream 5649 true Tp57577_TGAC_v2_scaf_358: 156061-161709 Trifolium pratense
Tp57577_TGAC_v2_gene18300 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_358: 156061-156560 Trifolium pratense
Tp57577_TGAC_v2_gene18300 1.0kb upstream 1.0kb upstream 6149 true Tp57577_TGAC_v2_scaf_358: 156561-162709 Trifolium pratense
Tp57577_TGAC_v2_gene18300 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_358: 161710-162709 Trifolium pratense
Tp57577_TGAC_v2_gene18300 1.0kb downstream 1.0kb downstream 6149 true Tp57577_TGAC_v2_scaf_358: 155561-161709 Trifolium pratense
Tp57577_TGAC_v2_gene18300 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_358: 155561-156560 Trifolium pratense
Tp57577_TGAC_v2_gene18300 2.0kb upstream 2.0kb upstream 7149 true Tp57577_TGAC_v2_scaf_358: 156561-163709 Trifolium pratense
Tp57577_TGAC_v2_gene18300 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_358: 161710-163709 Trifolium pratense
Tp57577_TGAC_v2_gene18300 2.0kb downstream 2.0kb downstream 7149 true Tp57577_TGAC_v2_scaf_358: 154561-161709 Trifolium pratense
Tp57577_TGAC_v2_gene18300 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_358: 154561-156560 Trifolium pratense
Tp57577_TGAC_v2_gene18300 5.0kb upstream 5.0kb upstream 10149 true Tp57577_TGAC_v2_scaf_358: 156561-166709 Trifolium pratense
Tp57577_TGAC_v2_gene18300 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_358: 161710-166709 Trifolium pratense
Tp57577_TGAC_v2_gene18300 5.0kb downstream 5.0kb downstream 10149 true Tp57577_TGAC_v2_scaf_358: 151561-161709 Trifolium pratense
Tp57577_TGAC_v2_gene18300 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_358: 151561-156560 Trifolium pratense
Tp57577_TGAC_v2_gene18300 10.0kb upstream 10.0kb upstream 15149 true Tp57577_TGAC_v2_scaf_358: 156561-171709 Trifolium pratense
Tp57577_TGAC_v2_gene18300 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_358: 161710-171709 Trifolium pratense
Tp57577_TGAC_v2_gene18300 10.0kb downstream 10.0kb downstream 15149 true Tp57577_TGAC_v2_scaf_358: 146561-161709 Trifolium pratense
Tp57577_TGAC_v2_gene18300 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_358: 146561-156560 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297142 5265 Fabidae View MSA
124065561 5270 Rosid View MSA
123740193 5271 Pentapetalae View MSA
122788711 5272 Eudicot View MSA
122045847 5273 Angiosperm View MSA
121343962 5274 Embryophyte View MSA
123426424 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain