Gene : Tp57577_TGAC_v2_gene18309 T. pratense v2
Defline:  (1 of 2) 2.6.1.52 - Phosphoserine transaminase / PSAT Genomic Order:  16
Name:  ? Tp57577_TGAC_v2_gene18309 Secondary Identifier:  ? PAC:35977069
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense SER-GLYSYN-PWY Trifolium pratense pathologic  
Tpratense SERSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene18309 0.5kb upstream 0.5kb upstream 2265 true Tp57577_TGAC_v2_scaf_358: 181586-183850 Trifolium pratense
Tp57577_TGAC_v2_gene18309 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_358: 181586-182085 Trifolium pratense
Tp57577_TGAC_v2_gene18309 0.5kb downstream 0.5kb downstream 2265 true Tp57577_TGAC_v2_scaf_358: 182086-184350 Trifolium pratense
Tp57577_TGAC_v2_gene18309 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_358: 183851-184350 Trifolium pratense
Tp57577_TGAC_v2_gene18309 1.0kb upstream 1.0kb upstream 2765 true Tp57577_TGAC_v2_scaf_358: 181086-183850 Trifolium pratense
Tp57577_TGAC_v2_gene18309 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_358: 181086-182085 Trifolium pratense
Tp57577_TGAC_v2_gene18309 1.0kb downstream 1.0kb downstream 2765 true Tp57577_TGAC_v2_scaf_358: 182086-184850 Trifolium pratense
Tp57577_TGAC_v2_gene18309 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_358: 183851-184850 Trifolium pratense
Tp57577_TGAC_v2_gene18309 2.0kb upstream 2.0kb upstream 3765 true Tp57577_TGAC_v2_scaf_358: 180086-183850 Trifolium pratense
Tp57577_TGAC_v2_gene18309 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_358: 180086-182085 Trifolium pratense
Tp57577_TGAC_v2_gene18309 2.0kb downstream 2.0kb downstream 3765 true Tp57577_TGAC_v2_scaf_358: 182086-185850 Trifolium pratense
Tp57577_TGAC_v2_gene18309 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_358: 183851-185850 Trifolium pratense
Tp57577_TGAC_v2_gene18309 5.0kb upstream 5.0kb upstream 6765 true Tp57577_TGAC_v2_scaf_358: 177086-183850 Trifolium pratense
Tp57577_TGAC_v2_gene18309 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_358: 177086-182085 Trifolium pratense
Tp57577_TGAC_v2_gene18309 5.0kb downstream 5.0kb downstream 6765 true Tp57577_TGAC_v2_scaf_358: 182086-188850 Trifolium pratense
Tp57577_TGAC_v2_gene18309 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_358: 183851-188850 Trifolium pratense
Tp57577_TGAC_v2_gene18309 10.0kb upstream 10.0kb upstream 11765 true Tp57577_TGAC_v2_scaf_358: 172086-183850 Trifolium pratense
Tp57577_TGAC_v2_gene18309 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_358: 172086-182085 Trifolium pratense
Tp57577_TGAC_v2_gene18309 10.0kb downstream 10.0kb downstream 11765 true Tp57577_TGAC_v2_scaf_358: 182086-193850 Trifolium pratense
Tp57577_TGAC_v2_gene18309 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_358: 183851-193850 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307465 5265 Fabidae View MSA
124074701 5270 Rosid View MSA
123739926 5271 Pentapetalae View MSA
122788097 5272 Eudicot View MSA
122043165 5273 Angiosperm View MSA
121346366 5274 Embryophyte View MSA
123424895 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain