Gene : Tp57577_TGAC_v2_gene28741 T. pratense v2
Defline:  (1 of 47) PF13976 - GAG-pre-integrase domain (gag_pre-integrs) Genomic Order:  7
Name:  ? Tp57577_TGAC_v2_gene28741 Secondary Identifier:  ? PAC:35968707
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28741 0.5kb upstream 0.5kb upstream 6132 true Tp57577_TGAC_v2_scaf_814: 63756-69887 Trifolium pratense
Tp57577_TGAC_v2_gene28741 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_814: 63756-64255 Trifolium pratense
Tp57577_TGAC_v2_gene28741 0.5kb downstream 0.5kb downstream 6132 true Tp57577_TGAC_v2_scaf_814: 64256-70387 Trifolium pratense
Tp57577_TGAC_v2_gene28741 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_814: 69888-70387 Trifolium pratense
Tp57577_TGAC_v2_gene28741 1.0kb upstream 1.0kb upstream 6632 true Tp57577_TGAC_v2_scaf_814: 63256-69887 Trifolium pratense
Tp57577_TGAC_v2_gene28741 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_814: 63256-64255 Trifolium pratense
Tp57577_TGAC_v2_gene28741 1.0kb downstream 1.0kb downstream 6632 true Tp57577_TGAC_v2_scaf_814: 64256-70887 Trifolium pratense
Tp57577_TGAC_v2_gene28741 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_814: 69888-70887 Trifolium pratense
Tp57577_TGAC_v2_gene28741 2.0kb upstream 2.0kb upstream 7632 true Tp57577_TGAC_v2_scaf_814: 62256-69887 Trifolium pratense
Tp57577_TGAC_v2_gene28741 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_814: 62256-64255 Trifolium pratense
Tp57577_TGAC_v2_gene28741 2.0kb downstream 2.0kb downstream 7632 true Tp57577_TGAC_v2_scaf_814: 64256-71887 Trifolium pratense
Tp57577_TGAC_v2_gene28741 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_814: 69888-71887 Trifolium pratense
Tp57577_TGAC_v2_gene28741 5.0kb upstream 5.0kb upstream 10632 true Tp57577_TGAC_v2_scaf_814: 59256-69887 Trifolium pratense
Tp57577_TGAC_v2_gene28741 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_814: 59256-64255 Trifolium pratense
Tp57577_TGAC_v2_gene28741 5.0kb downstream 5.0kb downstream 10632 true Tp57577_TGAC_v2_scaf_814: 64256-74887 Trifolium pratense
Tp57577_TGAC_v2_gene28741 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_814: 69888-74887 Trifolium pratense
Tp57577_TGAC_v2_gene28741 10.0kb upstream 10.0kb upstream 15632 true Tp57577_TGAC_v2_scaf_814: 54256-69887 Trifolium pratense
Tp57577_TGAC_v2_gene28741 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_814: 54256-64255 Trifolium pratense
Tp57577_TGAC_v2_gene28741 10.0kb downstream 10.0kb downstream 15632 true Tp57577_TGAC_v2_scaf_814: 64256-79887 Trifolium pratense
Tp57577_TGAC_v2_gene28741 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_814: 69888-79887 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041257 5273 Angiosperm View MSA
122301953 5265 Fabidae View MSA
124063588 5270 Rosid View MSA
123740495 5271 Pentapetalae View MSA
122793285 5272 Eudicot View MSA
121349608 5274 Embryophyte View MSA
123425538 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain