Gene : Tp57577_TGAC_v2_gene22318 T. pratense v2
Defline:  (1 of 4) PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene22318 Secondary Identifier:  ? PAC:35951759
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22318 0.5kb upstream 0.5kb upstream 4663 true Tp57577_TGAC_v2_scaf_691: 63593-68255 Trifolium pratense
Tp57577_TGAC_v2_gene22318 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_691: 67756-68255 Trifolium pratense
Tp57577_TGAC_v2_gene22318 0.5kb downstream 0.5kb downstream 4663 true Tp57577_TGAC_v2_scaf_691: 63093-67755 Trifolium pratense
Tp57577_TGAC_v2_gene22318 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_691: 63093-63592 Trifolium pratense
Tp57577_TGAC_v2_gene22318 1.0kb upstream 1.0kb upstream 5163 true Tp57577_TGAC_v2_scaf_691: 63593-68755 Trifolium pratense
Tp57577_TGAC_v2_gene22318 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_691: 67756-68755 Trifolium pratense
Tp57577_TGAC_v2_gene22318 1.0kb downstream 1.0kb downstream 5163 true Tp57577_TGAC_v2_scaf_691: 62593-67755 Trifolium pratense
Tp57577_TGAC_v2_gene22318 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_691: 62593-63592 Trifolium pratense
Tp57577_TGAC_v2_gene22318 2.0kb upstream 2.0kb upstream 6163 true Tp57577_TGAC_v2_scaf_691: 63593-69755 Trifolium pratense
Tp57577_TGAC_v2_gene22318 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_691: 67756-69755 Trifolium pratense
Tp57577_TGAC_v2_gene22318 2.0kb downstream 2.0kb downstream 6163 true Tp57577_TGAC_v2_scaf_691: 61593-67755 Trifolium pratense
Tp57577_TGAC_v2_gene22318 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_691: 61593-63592 Trifolium pratense
Tp57577_TGAC_v2_gene22318 5.0kb upstream 5.0kb upstream 9163 true Tp57577_TGAC_v2_scaf_691: 63593-72755 Trifolium pratense
Tp57577_TGAC_v2_gene22318 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_691: 67756-72755 Trifolium pratense
Tp57577_TGAC_v2_gene22318 5.0kb downstream 5.0kb downstream 9163 true Tp57577_TGAC_v2_scaf_691: 58593-67755 Trifolium pratense
Tp57577_TGAC_v2_gene22318 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_691: 58593-63592 Trifolium pratense
Tp57577_TGAC_v2_gene22318 10.0kb upstream 10.0kb upstream 14163 true Tp57577_TGAC_v2_scaf_691: 63593-77755 Trifolium pratense
Tp57577_TGAC_v2_gene22318 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_691: 67756-77755 Trifolium pratense
Tp57577_TGAC_v2_gene22318 10.0kb downstream 10.0kb downstream 14163 true Tp57577_TGAC_v2_scaf_691: 53593-67755 Trifolium pratense
Tp57577_TGAC_v2_gene22318 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_691: 53593-63592 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305220 5265 Fabidae View MSA
124065853 5270 Rosid View MSA
123740694 5271 Pentapetalae View MSA
122786557 5272 Eudicot View MSA
122042535 5273 Angiosperm View MSA
121309984 5274 Embryophyte View MSA
123347596 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain