Gene : Tp57577_TGAC_v2_gene15779 T. pratense v2
Defline:  (1 of 2) PTHR11177//PTHR11177:SF208 - CHITINASE // SUBFAMILY NOT NAMED Genomic Order:  191
Name:  ? Tp57577_TGAC_v2_gene15779 Secondary Identifier:  ? PAC:35966009
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6902 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene15779 0.5kb upstream 0.5kb upstream 2038 true Tp57577_TGAC_v2_LG4: 1588647-1590684 Trifolium pratense
Tp57577_TGAC_v2_gene15779 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 1590185-1590684 Trifolium pratense
Tp57577_TGAC_v2_gene15779 0.5kb downstream 0.5kb downstream 2038 true Tp57577_TGAC_v2_LG4: 1588147-1590184 Trifolium pratense
Tp57577_TGAC_v2_gene15779 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 1588147-1588646 Trifolium pratense
Tp57577_TGAC_v2_gene15779 1.0kb upstream 1.0kb upstream 2538 true Tp57577_TGAC_v2_LG4: 1588647-1591184 Trifolium pratense
Tp57577_TGAC_v2_gene15779 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 1590185-1591184 Trifolium pratense
Tp57577_TGAC_v2_gene15779 1.0kb downstream 1.0kb downstream 2538 true Tp57577_TGAC_v2_LG4: 1587647-1590184 Trifolium pratense
Tp57577_TGAC_v2_gene15779 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 1587647-1588646 Trifolium pratense
Tp57577_TGAC_v2_gene15779 2.0kb upstream 2.0kb upstream 3538 true Tp57577_TGAC_v2_LG4: 1588647-1592184 Trifolium pratense
Tp57577_TGAC_v2_gene15779 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 1590185-1592184 Trifolium pratense
Tp57577_TGAC_v2_gene15779 2.0kb downstream 2.0kb downstream 3538 true Tp57577_TGAC_v2_LG4: 1586647-1590184 Trifolium pratense
Tp57577_TGAC_v2_gene15779 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 1586647-1588646 Trifolium pratense
Tp57577_TGAC_v2_gene15779 5.0kb upstream 5.0kb upstream 6538 true Tp57577_TGAC_v2_LG4: 1588647-1595184 Trifolium pratense
Tp57577_TGAC_v2_gene15779 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 1590185-1595184 Trifolium pratense
Tp57577_TGAC_v2_gene15779 5.0kb downstream 5.0kb downstream 6538 true Tp57577_TGAC_v2_LG4: 1583647-1590184 Trifolium pratense
Tp57577_TGAC_v2_gene15779 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 1583647-1588646 Trifolium pratense
Tp57577_TGAC_v2_gene15779 10.0kb upstream 10.0kb upstream 11538 true Tp57577_TGAC_v2_LG4: 1588647-1600184 Trifolium pratense
Tp57577_TGAC_v2_gene15779 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 1590185-1600184 Trifolium pratense
Tp57577_TGAC_v2_gene15779 10.0kb downstream 10.0kb downstream 11538 true Tp57577_TGAC_v2_LG4: 1578647-1590184 Trifolium pratense
Tp57577_TGAC_v2_gene15779 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 1578647-1588646 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305195 5265 Fabidae View MSA
124073719 5270 Rosid View MSA
123750744 5271 Pentapetalae View MSA
122797322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain