Gene : Tp57577_TGAC_v2_gene16828 T. pratense v2
Defline:  (1 of 2) PTHR15371:SF1 - OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC Genomic Order:  1390
Name:  ? Tp57577_TGAC_v2_gene16828 Secondary Identifier:  ? PAC:35965725
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16828 0.5kb upstream 0.5kb upstream 2392 true Tp57577_TGAC_v2_LG4: 13208202-13210593 Trifolium pratense
Tp57577_TGAC_v2_gene16828 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 13210094-13210593 Trifolium pratense
Tp57577_TGAC_v2_gene16828 0.5kb downstream 0.5kb downstream 2392 true Tp57577_TGAC_v2_LG4: 13207702-13210093 Trifolium pratense
Tp57577_TGAC_v2_gene16828 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 13207702-13208201 Trifolium pratense
Tp57577_TGAC_v2_gene16828 1.0kb upstream 1.0kb upstream 2892 true Tp57577_TGAC_v2_LG4: 13208202-13211093 Trifolium pratense
Tp57577_TGAC_v2_gene16828 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 13210094-13211093 Trifolium pratense
Tp57577_TGAC_v2_gene16828 1.0kb downstream 1.0kb downstream 2892 true Tp57577_TGAC_v2_LG4: 13207202-13210093 Trifolium pratense
Tp57577_TGAC_v2_gene16828 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 13207202-13208201 Trifolium pratense
Tp57577_TGAC_v2_gene16828 2.0kb upstream 2.0kb upstream 3892 true Tp57577_TGAC_v2_LG4: 13208202-13212093 Trifolium pratense
Tp57577_TGAC_v2_gene16828 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 13210094-13212093 Trifolium pratense
Tp57577_TGAC_v2_gene16828 2.0kb downstream 2.0kb downstream 3892 true Tp57577_TGAC_v2_LG4: 13206202-13210093 Trifolium pratense
Tp57577_TGAC_v2_gene16828 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 13206202-13208201 Trifolium pratense
Tp57577_TGAC_v2_gene16828 5.0kb upstream 5.0kb upstream 6892 true Tp57577_TGAC_v2_LG4: 13208202-13215093 Trifolium pratense
Tp57577_TGAC_v2_gene16828 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 13210094-13215093 Trifolium pratense
Tp57577_TGAC_v2_gene16828 5.0kb downstream 5.0kb downstream 6892 true Tp57577_TGAC_v2_LG4: 13203202-13210093 Trifolium pratense
Tp57577_TGAC_v2_gene16828 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 13203202-13208201 Trifolium pratense
Tp57577_TGAC_v2_gene16828 10.0kb upstream 10.0kb upstream 11892 true Tp57577_TGAC_v2_LG4: 13208202-13220093 Trifolium pratense
Tp57577_TGAC_v2_gene16828 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 13210094-13220093 Trifolium pratense
Tp57577_TGAC_v2_gene16828 10.0kb downstream 10.0kb downstream 11892 true Tp57577_TGAC_v2_LG4: 13198202-13210093 Trifolium pratense
Tp57577_TGAC_v2_gene16828 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 13198202-13208201 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311565 5265 Fabidae View MSA
124062569 5270 Rosid View MSA
123744668 5271 Pentapetalae View MSA
122786883 5272 Eudicot View MSA
122042024 5273 Angiosperm View MSA
121351081 5274 Embryophyte View MSA
123382000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain