Gene : Tp57577_TGAC_v2_gene21038 T. pratense v2
Defline:  (1 of 2) PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Genomic Order:  12
Name:  ? Tp57577_TGAC_v2_gene21038 Secondary Identifier:  ? PAC:35991136
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5980 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21038 0.5kb upstream 0.5kb upstream 3149 true Tp57577_TGAC_v2_scaf_385: 96367-99515 Trifolium pratense
Tp57577_TGAC_v2_gene21038 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_385: 99016-99515 Trifolium pratense
Tp57577_TGAC_v2_gene21038 0.5kb downstream 0.5kb downstream 3149 true Tp57577_TGAC_v2_scaf_385: 95867-99015 Trifolium pratense
Tp57577_TGAC_v2_gene21038 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_385: 95867-96366 Trifolium pratense
Tp57577_TGAC_v2_gene21038 1.0kb upstream 1.0kb upstream 3649 true Tp57577_TGAC_v2_scaf_385: 96367-100015 Trifolium pratense
Tp57577_TGAC_v2_gene21038 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_385: 99016-100015 Trifolium pratense
Tp57577_TGAC_v2_gene21038 1.0kb downstream 1.0kb downstream 3649 true Tp57577_TGAC_v2_scaf_385: 95367-99015 Trifolium pratense
Tp57577_TGAC_v2_gene21038 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_385: 95367-96366 Trifolium pratense
Tp57577_TGAC_v2_gene21038 2.0kb upstream 2.0kb upstream 4649 true Tp57577_TGAC_v2_scaf_385: 96367-101015 Trifolium pratense
Tp57577_TGAC_v2_gene21038 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_385: 99016-101015 Trifolium pratense
Tp57577_TGAC_v2_gene21038 2.0kb downstream 2.0kb downstream 4649 true Tp57577_TGAC_v2_scaf_385: 94367-99015 Trifolium pratense
Tp57577_TGAC_v2_gene21038 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_385: 94367-96366 Trifolium pratense
Tp57577_TGAC_v2_gene21038 5.0kb upstream 5.0kb upstream 7649 true Tp57577_TGAC_v2_scaf_385: 96367-104015 Trifolium pratense
Tp57577_TGAC_v2_gene21038 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_385: 99016-104015 Trifolium pratense
Tp57577_TGAC_v2_gene21038 5.0kb downstream 5.0kb downstream 7649 true Tp57577_TGAC_v2_scaf_385: 91367-99015 Trifolium pratense
Tp57577_TGAC_v2_gene21038 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_385: 91367-96366 Trifolium pratense
Tp57577_TGAC_v2_gene21038 10.0kb upstream 10.0kb upstream 12649 true Tp57577_TGAC_v2_scaf_385: 96367-109015 Trifolium pratense
Tp57577_TGAC_v2_gene21038 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_385: 99016-109015 Trifolium pratense
Tp57577_TGAC_v2_gene21038 10.0kb downstream 10.0kb downstream 12649 true Tp57577_TGAC_v2_scaf_385: 86367-99015 Trifolium pratense
Tp57577_TGAC_v2_gene21038 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_385: 86367-96366 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314600 5265 Fabidae View MSA
124063526 5270 Rosid View MSA
123741698 5271 Pentapetalae View MSA
122788923 5272 Eudicot View MSA
122042963 5273 Angiosperm View MSA
121350379 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain